Transcript Information: R_Transcript_411664.p1


Annotated TAIR IDAT5G04560.2
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)DME
Annotation TypeHomolog
Chromosome Positionchr5:1309786-1318091 | Forward length=1987
E-Value3E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29361331294454
Replicate 20.16887104892465
Replicate 30.12282433027428
Condition 2: 8 Hour
Replicate 10.13129150105762
Replicate 20.059948744882535
Replicate 30.19465534177359
Condition 3: 24 Hour
Replicate 10.30774540519711
Replicate 20.35477628242215
Replicate 30.29340086711659


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_411664.p1 GENE.R_Transcript_411664~~R_Transcript_411664.p1 ORF type:complete len:373 (+),score=66.32,RRM_DME|PF15628.2|6.7e-42 R_Transcript_411664:1013-2131(+)
ATGATTACTTTCGGGAAGATATTTTGTGTGAAGAAAAATCCAAATTGTGGAGCTTGTCCATTCAAAGGAGAATGCAAATACCATGCAAGTGTAGTTGCAAGCAAACTTGCCCTACCAAAAGGAGAAGAAAAAAGGATGACAAAATCGAAGAAAAATGTTAAAAGATTTATTAGAAATCCATTTGACATCAAGAGAAGATCGTCGTCACAATATATGTCTCTCTCAGCTTCAAATTATGACAAAAATCTCGAGATGACACCATCGAACAGTACTGCAATGGAAAAAAATGAGCCTATAGTAGAGATGCCGCCATCTCCTTCTCCCGATCCAGAAGTTCTAGAACCAAAGGTGACGGACATTGAAGATTTATTCACCTATGATAACAATGATGTTGAGGAGGAGCTTTATGAAATTAAGCTCAATACAGAGGAGTTTAAGCAGACATTTTGGAACTACATTGAAGAGAATAATGTACCTCTGAACAAAAATGATGATATATCAAGAGCTCTTGTTAGTCTTTCACCAGAAGATGTTCCTATTCCTTTACCCAAACATATGGTCATTGCTCGTTTGAGAACCGAGCATCAAGTATACGAGTTACCCGATGGTCATCCGCTTCTCAAAAATTTGGATCGACGAGATGAGAAAGATCCTTTACCATATCTTCTTGCCATATGGACATCAGATCAAATAAGGAGTGCAGAAACTTTGCAAGAATGTGGTGCTTGCAGTAATGAGCCTTGTTCAGAAAATCGTTCTTTAACTGTTGCTGGAACCTTTTTGATACCATCTCGGACAGCATTGAGAGGATCTTTTCCACTCAATGGTACATATTTCCAGGTGAATGAGGTTTTTGTTGATGATGAAACTAGCGAGCAGCCAATCGATGTTCCAAGAGCTTGGATATGGAATCTACCAAGGCGTACTATGTATTGTGGATATAGTACAACCTCAATATTCAGAGGTTTAACATGGAGGGAGATTCAACGGTGTTGTTGCGAAGGCTTTATCTGTACTAGAGGATTTAATCGGCAAACACGTGGACCAAAGCCTTTACCACTCAGATTTCATAATCGTCCAAGGTATAAATCTCAACAAGATGAAGAAGATGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_411664.p1 GENE.R_Transcript_411664~~R_Transcript_411664.p1 ORF type:complete len:373 (+),score=66.32,RRM_DME|PF15628.2|6.7e-42 R_Transcript_411664:1013-2131(+)
MITFGKIFCVKKNPNCGACPFKGECKYHASVVASKLALPKGEEKRMTKSKKNVKRFIRNPFDIKRRSSSQYMSLSASNYDKNLEMTPSNSTAMEKNEPIVEMPPSPSPDPEVLEPKVTDIEDLFTYDNNDVEEELYEIKLNTEEFKQTFWNYIEENNVPLNKNDDISRALVSLSPEDVPIPLPKHMVIARLRTEHQVYELPDGHPLLKNLDRRDEKDPLPYLLAIWTSDQIRSAETLQECGACSNEPCSENRSLTVAGTFLIPSRTALRGSFPLNGTYFQVNEVFVDDETSEQPIDVPRAWIWNLPRRTMYCGYSTTSIFRGLTWREIQRCCCEGFICTRGFNRQTRGPKPLPLRFHNRPRYKSQQDEEDDD*

Click here to download the sequence:
Link to NCBI Protein BLAST