Transcript Information: R_Transcript_411881.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeHomolog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value4E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20.35287899859325
Replicate 30.19249359324498
Condition 2: 8 Hour
Replicate 10.20576357098525
Replicate 20.37581314018799
Replicate 30.30506908605692
Condition 3: 24 Hour
Replicate 10.38584549962528
Replicate 20.18533831000485
Replicate 30.18393029148653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_411881.p1 GENE.R_Transcript_411881~~R_Transcript_411881.p1 ORF type:5prime_partial len:119 (+),score=6.46,MatE|PF01554.14|1.6e-10,MatE|PF01554.14|2.4e+02 R_Transcript_411881:3-359(+)
CTTTGGGCAAGCTTGTTTAGTGATAGCCCCAACATTATCAAGGCATTCTCCTCTATGACTCCTTTGCTTTGCATTTCCATAGTCTTCGATTCAATTCAAGGCATCATATCAGGAGTCTGTAGGGGATGTGGTTGGCAGCACTTGGCAATGTTCATAAATCTTGGCACATTCTATGGCATTGGCATGCCCATTGCGGTCGTTTTTGGTTTAGTGCTCAAATTCTATGCTAAGGGTCTCTGGATTGGCTTAATCTCTGGCCTCGGAACTCAGTCCTTTACTCTTTTCCTCCTGACCTGCTTCAAGAAATGGATAGCACACTTGAGTTTTCTAGCCATAAATCTGAAACTTCAGAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_411881.p1 GENE.R_Transcript_411881~~R_Transcript_411881.p1 ORF type:5prime_partial len:119 (+),score=6.46,MatE|PF01554.14|1.6e-10,MatE|PF01554.14|2.4e+02 R_Transcript_411881:3-359(+)
LWASLFSDSPNIIKAFSSMTPLLCISIVFDSIQGIISGVCRGCGWQHLAMFINLGTFYGIGMPIAVVFGLVLKFYAKGLWIGLISGLGTQSFTLFLLTCFKKWIAHLSFLAINLKLQN*

Click here to download the sequence:
Link to NCBI Protein BLAST