Transcript Information: R_Transcript_41214.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value4.8E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1988682968742
Replicate 22.5754297807933
Replicate 33.6669829415878
Condition 2: 8 Hour
Replicate 14.2252116229134
Replicate 24.509367024106
Replicate 37.283286589885
Condition 3: 24 Hour
Replicate 16.1570834352886
Replicate 24.2643224050389
Replicate 35.9155958613236


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41214.p1 GENE.R_Transcript_41214~~R_Transcript_41214.p1 ORF type:complete len:481 (+),score=69.73,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|4.3e-12,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|3.4e-13,PPR_2|PF13041.2|4.7e-08,PPR_2|PF13041.2|2.5e-13,PPR_2|PF13041.2|3.6e-07,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|4.6e-07,PPR_1|PF12854.3|9e-06,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.8e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|0.028,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.034,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0049,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.5e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00013 R_Transcript_41214:430-1872(+)
ATGAGGAAAGCTTATTTTCATTGTAACAAACTTACTTCAAGATGGGTTCTTTTTAGACTGTTCACTTCAAGTGAATTGTCAAATGACCAACCAGAAGCCACAATTAAACAAATTTCTAAAATCGTGATGTCTTGTCCTAAAGTAGGACTTGATGTTAGTCTTGACCATAGTGGGATTAGGGTTTCGCCTGAGATAGTTGAGAGCGTTCTCAAGAGATTTGAGAATGCGGGTATGGTTTCATTTCGGTTCTTTGAATGGGCCGCCATGCAAAGGCATTACACCCATAGTGTTGAGGCCTACCATATGATGATAGGGTCGTTGGCGAAAATTAGGCAGTTTGATATCATGTGGGATCTTGTGGGGACTATGAGGAAGAAGGGGATGTTGAATGTTGAGACGTTTTGTATCATCATGAGAAGGTATGCTCGGATGCAGAAGGTGGATGAAGCGCTTTATGCGTTCAATGTTATGGAGAAACATGGTGTTACGCCGAATCTTTATGCGTTTAATGGGCTTTTGAGTGCTTTGTGCAAGTCCAAGAATGTGAGAAAGGCCCAAGAAATCTTTGGTAAGATGAAAGAACAATTTGTTCCTGACTTGAAAACTTATAGTATTTTGCTCGAAGGGTGGGGAAGGGAACCAAATCTACCCAAGGCAAGAGAGATCTTTAGGCAAATGGTTGATGATGGTTGCAATCCTGATATTGTGACTTATGGTATAATGGTGGACGTTCTTTGTAAGGCAGGGAGAGTCGATGAAGCTGTTGACGTTGTTAAGAGTATGGATGCTAGTGGTTGTAGGCCAACATCTTTCATCTATAGTATTCTGGTTCATACCTATGGGGTTGAGAATCGGATTGAAGATGCCATAGATACATTCTTGGAAATGGCAAAAAATGGTGTAGTGGCTGATGTGGCAGTGTATAACGCTCTGATTAGTGCTTTTTGCAAGGTCAATAAATTCAATAACGTGTTTCGGGTTTTAAAAGAGATGGATGGTAAAGGGGTCGCACCTAATGCAAGGACCTGTAATATAATTTTGAACAGTTTGATTGGGCAGGGGTTGACTGATGAAGCTTTCAGGGTCTTCCGAAGGATGATTAAAGTATGTGATCCTGATGCAGACACATATACTTTGATGATAAAAATGTTCTTCGACAGAGATGAGTGCGAAATGGCTCTGAAGGTGTGGAAGTATATGAAGTCAAAAAGGTTTGTACCAAGCATGCACACCTATTCTGTTCTTATCAATGGGCTGTGTGAAAAGGGCAGGGTTAGTGATGCGTGTATTTATATGGAGGAGATGATTGAAAAGGGGATTCAACCATCAGTCTTGACATTTCGTAAGCTGAGGCAGTTGCTTATGAAAGAAAGTAGACAAGATGTACTTCAATTCCTTCAGGAGAAGATGAATCTTTTAGTTAAGGAGCCTCTAAACGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41214.p1 GENE.R_Transcript_41214~~R_Transcript_41214.p1 ORF type:complete len:481 (+),score=69.73,PPR_2|PF13041.2|0.0014,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|1.6e-10,PPR_2|PF13041.2|1.2e-07,PPR_2|PF13041.2|4.3e-12,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|3.4e-13,PPR_2|PF13041.2|4.7e-08,PPR_2|PF13041.2|2.5e-13,PPR_2|PF13041.2|3.6e-07,PPR_1|PF12854.3|0.76,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.6e-12,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|4.6e-07,PPR_1|PF12854.3|9e-06,PPR_1|PF12854.3|8.5,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.8e+03,PPR|PF01535.16|1.4,PPR|PF01535.16|0.028,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.034,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0049,PPR|PF01535.16|6.1e-06,PPR|PF01535.16|0.0062,PPR|PF01535.16|0.0032,PPR|PF01535.16|1.5e-06,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.00013 R_Transcript_41214:430-1872(+)
MRKAYFHCNKLTSRWVLFRLFTSSELSNDQPEATIKQISKIVMSCPKVGLDVSLDHSGIRVSPEIVESVLKRFENAGMVSFRFFEWAAMQRHYTHSVEAYHMMIGSLAKIRQFDIMWDLVGTMRKKGMLNVETFCIIMRRYARMQKVDEALYAFNVMEKHGVTPNLYAFNGLLSALCKSKNVRKAQEIFGKMKEQFVPDLKTYSILLEGWGREPNLPKAREIFRQMVDDGCNPDIVTYGIMVDVLCKAGRVDEAVDVVKSMDASGCRPTSFIYSILVHTYGVENRIEDAIDTFLEMAKNGVVADVAVYNALISAFCKVNKFNNVFRVLKEMDGKGVAPNARTCNIILNSLIGQGLTDEAFRVFRRMIKVCDPDADTYTLMIKMFFDRDECEMALKVWKYMKSKRFVPSMHTYSVLINGLCEKGRVSDACIYMEEMIEKGIQPSVLTFRKLRQLLMKESRQDVLQFLQEKMNLLVKEPLND*

Click here to download the sequence:
Link to NCBI Protein BLAST