Transcript Information: R_Transcript_412436.p1


Annotated TAIR IDAT1G49920.1
Annotated Gene NameMuDR family transposase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18481798-18484233 | Reverse length=785
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30677245302048
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.20576357098525
Replicate 20
Replicate 30.15253454302846
Condition 3: 24 Hour
Replicate 10.19292274981264
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_412436.p1 GENE.R_Transcript_412436~~R_Transcript_412436.p1 ORF type:5prime_partial len:119 (+),score=3.31,SWIM|PF04434.13|1.6e-08 R_Transcript_412436:2-358(+)
GGGACAGGGCAATTGATCACATGGAAAAGGGGGAAAAGGCACACCGTTAACCTTCATAGAAGGACTTGTACGTGTCAAAAGGTTCAAATTTATAAAATCCCTTGTTCACATGTCCTTGCAGTTTGTAGGGATCGCAGCATCTCACACAGGACATTTGTGGACCCTTTCTACTCCTCAATCGACTATGATGCCTCTTACAAGAAGGTTTTCAAACCCATCCCTGATCCTGCGTACTGGCCGCCTTACCAGGGTCCGACGATCCTGCCAGATTCGACAATGGTTCGAGGTAAAGGTCGACCACGCTCTAAGAGAATTCGAAATGATATGGATGGGGGTACTCGTGGTCAGGTGACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_412436.p1 GENE.R_Transcript_412436~~R_Transcript_412436.p1 ORF type:5prime_partial len:119 (+),score=3.31,SWIM|PF04434.13|1.6e-08 R_Transcript_412436:2-358(+)
GTGQLITWKRGKRHTVNLHRRTCTCQKVQIYKIPCSHVLAVCRDRSISHRTFVDPFYSSIDYDASYKKVFKPIPDPAYWPPYQGPTILPDSTMVRGKGRPRSKRIRNDMDGGTRGQVT*

Click here to download the sequence:
Link to NCBI Protein BLAST