Transcript Information: R_Transcript_412650.p1


Annotated TAIR IDAT5G28400.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28320.1); Has 2580 Blast hits to 2028 proteins in 270 species: Archae - 20; Bacteria - 158; Metazoa - 939; Fungi - 198; Plants - 144; Viruses - 14; Other Eukaryotes - 1107 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10344024-10348234 | Reverse length=973
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.099742956036715
Replicate 20.11473388205627
Replicate 30.50069371794869
Condition 2: 8 Hour
Replicate 10.26760508139066
Replicate 20.12219061115402
Replicate 30.29756738721946
Condition 3: 24 Hour
Replicate 10.25090499702409
Replicate 20.60260270192834
Replicate 30.23920988728849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_412650.p1 GENE.R_Transcript_412650~~R_Transcript_412650.p1 ORF type:internal len:183 (+),score=50.07 R_Transcript_412650:1-546(+)
CATGTACTTCCTAAAACTAGTTCAGTTGTGAAATATGTAGTTAGTGGTGAAAGCGGTGAAAGTGGTGGATGGGTTAATAGAATTAGGAGTGTTTCTGTTCCACCCAATTTGGTGCCTAACATGTCGAAAATTAGCTGTGCAATGGTTAGTGGTTTTCTATTTATTTGGGTGGTGAAGAAGGTGTTTAGTTTGGGAGGAAATTGGACAGAGGTGACAAGGTTAGAGAGGGAAATGCTTAGGAGAAAGATGAACTCAAGAATGGAGAAACAGACGATGCAGAAGGGTAGTCTCGAAATTGTGGAAATGCCATCTGAGGCCACTACTATGGTTACTGAAAGGCCTCAGCTTGATAAGCAGGAGCTGTTGGATAACATTAGGAAAGCAAAAAACTTGAATAATAAGCAGGGTGAGCTAGATTTTGCAAGTTCTCAGGGTGTTGGTGGTGTAGAAATGGATGCCAGAATTGGGGAGATACAAAGAATGGCAAGACATGCTAGGGAGATTGAGAGAGGGGAGAGCTCTCCAATTAAGGGGGGTGAATCGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_412650.p1 GENE.R_Transcript_412650~~R_Transcript_412650.p1 ORF type:internal len:183 (+),score=50.07 R_Transcript_412650:1-546(+)
HVLPKTSSVVKYVVSGESGESGGWVNRIRSVSVPPNLVPNMSKISCAMVSGFLFIWVVKKVFSLGGNWTEVTRLEREMLRRKMNSRMEKQTMQKGSLEIVEMPSEATTMVTERPQLDKQELLDNIRKAKNLNNKQGELDFASSQGVGGVEMDARIGEIQRMARHAREIERGESSPIKGGESD

Click here to download the sequence:
Link to NCBI Protein BLAST