Transcript Information: R_Transcript_412689.p1


Annotated TAIR IDAT4G30790.1
Annotated Gene NameINVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14993383-14997785 | Reverse length=1148
E-Value4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1224373203161
Replicate 20.48828605619298
Replicate 31.775716092725
Condition 2: 8 Hour
Replicate 10.56943871970338
Replicate 21.5600615238036
Replicate 31.6885219181755
Condition 3: 24 Hour
Replicate 10.8898374894459
Replicate 20.51291299745529
Replicate 31.5270491642021


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_412689.p1 GENE.R_Transcript_412689~~R_Transcript_412689.p1 ORF type:internal len:129 (-),score=37.28 R_Transcript_412689:2-385(-)
TCGGTTTCGAGGGGGAAGCTTTTGATACACATTGCAGAGAATGGTCATTCATTTGAGGTTGATTGTGATGAATCTACTGCTGTGGAGGAAGTTCAAAGGTTTATTGAAACAATGGCTGGAATTCAATTGAATGACCAGCTTTTACTTTGTGGTGACTTGAAGCTTGAAATTCATGAGCCACTTGGAGCATATAAGCTACCTTCGGATGAGCAAGAAGTGTTTTGTTTCAATAAAGCTAGATTGCAAACCAATGCTGTTCCCCCGGATGCAGAGCAAGTTAAAATCCATGACGTTCTGGAACCACCTTCACCGTCTTCTAACCAGGATCCCCATCCATTGGATAATGCCATGGACCCTGCACTTAAGGCTTTACCTTCTTATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_412689.p1 GENE.R_Transcript_412689~~R_Transcript_412689.p1 ORF type:internal len:129 (-),score=37.28 R_Transcript_412689:2-385(-)
SVSRGKLLIHIAENGHSFEVDCDESTAVEEVQRFIETMAGIQLNDQLLLCGDLKLEIHEPLGAYKLPSDEQEVFCFNKARLQTNAVPPDAEQVKIHDVLEPPSPSSNQDPHPLDNAMDPALKALPSYE

Click here to download the sequence:
Link to NCBI Protein BLAST