Transcript Information: R_Transcript_41278.p1


Annotated TAIR IDAT2G47620.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3A
Annotated Gene Symbol(s)ATSWI3A, CHB1, SWI3A
Annotation TypeOrtholog
Chromosome Positionchr2:19532034-19534251 | Forward length=512
E-Value3.2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.203602340097
Replicate 27.9006697442771
Replicate 311.414010142413
Condition 2: 8 Hour
Replicate 110.728342889257
Replicate 212.371484455089
Replicate 316.24912222203
Condition 3: 24 Hour
Replicate 111.991706868079
Replicate 210.800255642293
Replicate 314.704626344634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41278.p1 GENE.R_Transcript_41278~~R_Transcript_41278.p1 ORF type:complete len:582 (+),score=141.71,SWIRM|PF04433.13|3.5e-27,SWIRM-assoc_1|PF16495.1|3.6e-21,Myb_DNA-binding|PF00249.27|1e-10 R_Transcript_41278:93-1838(+)
ATGGAAACGAAAACAGCAGAGCATCGTCTCCCACCTCCGCATCCAGCATATGTAACAGCAACAACAACAACAACAACAACTCCATCTCAACAACAACAACATCAATTTAAACCAACATCATGCTTTCCCGCTTCTATTCATACTGAACTCGACCTCTACACTATCCCAACTCATTCCTGTTGGTTCTCATGGGACTCCATTCACGAAACCGAGAGGATCGAGCTCAGGGAGTTCTTCGATGGCAGCTCCTTCACCCGAACCCCCAAAATCTACAAAGAGTATAGGGATTTCATCATCTCCAAGTACCGCGAAGATCCTTCCAGACGCCTCACCTTTACTCACGTCCGCAAGTCTCTCGTTGGTGACGTCTCTGCCCTTCGAAAGGTCTTTTATTTTCTTGATAAATGGGGCTTGATTAACTTCGCTGCCGTCCTCGAAAACCACAAACAGGATGATGTTAGTGTTAGGGCTAGGGTTAGGGTTGAGGAAGGCCCCCCCATTGGTGTTAGGGTTGTCGCCATTCCCAATTCCTCCAAGCCTTTGACGCTGCCTCCTCCTTTCGCTGCTCCTGGGGCTCATCATGCCTTTAAGTTGCCCCCTTTGACTTCTTATTCTGATGTTTTTGGGGGAGACAAGCTGCCGTGTGCCAATTGTAAACACACTTGTGATTCCAAGTATTATGAATCCACTCAGGAGAAATATGTGATATGCTTGAAATGCTTTGAGAAGGAGACATATGGGGAAAACAAGTCCAAAGGTGATTTCAAACTGAATGACAGCACAGAAAGTGGTGGTCGTGAAGGAGGAGTGTGGACTGAGGCAGAAACCCTTCTTCTTCTAGAATCTGTTTTGAAGCATGGAGATGACTGGGACCTTGTGGCGCAAAATGTGCAGACCAAGACAAAACTCCAATGCATTTCACGCCTCATTGAGTTACCATTCGGGGAGCTCATGTTGGGTTCCCATGGAAAGATCTCCTCCAAAGGGGTTGTAGATGAAGTTGATGCTGGTCAGGAGCAGAAGCCTGCCATTGAATCCCAGGAAAATAACAAGGAGGATGATCATCATCCAGAGGTTATTGAAAGGGAGAACACTGAAGAGATTGAAAGCCTAGAACCACCTCCAAAGAAAAAACACATCGATTATTCAGATCCTAGTAGATCCTTGATGGAACAGGTAGCTCTCATTTCTACAATGGTTGGGCCACAAATAACAGCAACCGCGGCTTCTGCTGCTGTTTCAGTTCTCTCTGATGGGAACCCTTTGGTGAAGGAGATTTTCTACTCAGAGGACAACAATTCCATGGACGTGTGTAAATCAGGCAACCTCAGTATGGAACTGGACAGGGCCCTTCAACCAGAAGACATGGAAATGAAGGATGCTTCTCATTCATCAGAGGTTGACAAGTTATCGACTTCGAGAGATTCCATTCCTCTTGCCTTACGAATGAGAGCTGCAGTTGGTACGGCACTTGGGGCAGCTGCTGCTCGTGCCAGATTATTGGCTGATCAGGAAGAAAGGGAGATTGAGCATTTGATGGCATTCGTGATCGAGAATCAGTTGAAGAAATTGCAACGGAAAGCAAAGTTCTTTGATGATCTTGAGCATTTGTTGGAGAAGGAACGTGAACTATTAGATGAATCAAAAGACTCCATAATTGTCGAGAGGATGGATACCTTGGGGAGAATATTTGCTTCTGGGATTTCCCAATGGAGGGATCACAGATCATTGAAACTGCCGCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41278.p1 GENE.R_Transcript_41278~~R_Transcript_41278.p1 ORF type:complete len:582 (+),score=141.71,SWIRM|PF04433.13|3.5e-27,SWIRM-assoc_1|PF16495.1|3.6e-21,Myb_DNA-binding|PF00249.27|1e-10 R_Transcript_41278:93-1838(+)
METKTAEHRLPPPHPAYVTATTTTTTTPSQQQQHQFKPTSCFPASIHTELDLYTIPTHSCWFSWDSIHETERIELREFFDGSSFTRTPKIYKEYRDFIISKYREDPSRRLTFTHVRKSLVGDVSALRKVFYFLDKWGLINFAAVLENHKQDDVSVRARVRVEEGPPIGVRVVAIPNSSKPLTLPPPFAAPGAHHAFKLPPLTSYSDVFGGDKLPCANCKHTCDSKYYESTQEKYVICLKCFEKETYGENKSKGDFKLNDSTESGGREGGVWTEAETLLLLESVLKHGDDWDLVAQNVQTKTKLQCISRLIELPFGELMLGSHGKISSKGVVDEVDAGQEQKPAIESQENNKEDDHHPEVIERENTEEIESLEPPPKKKHIDYSDPSRSLMEQVALISTMVGPQITATAASAAVSVLSDGNPLVKEIFYSEDNNSMDVCKSGNLSMELDRALQPEDMEMKDASHSSEVDKLSTSRDSIPLALRMRAAVGTALGAAAARARLLADQEEREIEHLMAFVIENQLKKLQRKAKFFDDLEHLLEKERELLDESKDSIIVERMDTLGRIFASGISQWRDHRSLKLPP*

Click here to download the sequence:
Link to NCBI Protein BLAST