Transcript Information: R_Transcript_41280.p2


Annotated TAIR IDAT2G47620.1
Annotated Gene NameSWITCH/sucrose nonfermenting 3A
Annotated Gene Symbol(s)ATSWI3A, CHB1, SWI3A
Annotation TypeHomolog
Chromosome Positionchr2:19532034-19534251 | Forward length=512
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.907450960837
Replicate 215.597251737821
Replicate 315.70747720879
Condition 2: 8 Hour
Replicate 117.664802569084
Replicate 221.402558333706
Replicate 315.817832112051
Condition 3: 24 Hour
Replicate 116.562418071415
Replicate 216.541444167933
Replicate 316.7284600107


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41280.p2 GENE.R_Transcript_41280~~R_Transcript_41280.p2 ORF type:complete len:140 (+),score=43.36,SWIRM-assoc_1|PF16495.1|3.2e-22 R_Transcript_41280:1559-1978(+)
ATGTCTTCACATTCAATACCCACACCTGAACCTTTCAGGGCCCTTCAACCAGAAGACATGGAAATGAAGGATGCTTCTCATTCATCAGAGGTTGACAAGTTATCGACTTCGAGAGATTCCATTCCTCTTGCCTTACGAATGAGAGCTGCAGTTGGTACGGCACTTGGGGCAGCTGCTGCTCGTGCCAGATTATTGGCTGATCAGGAAGAAAGGGAGATTGAGCATTTGATGGCATTCGTGATCGAGAATCAGTTGAAGAAATTGCAACGGAAAGCAAAGTTCTTTGATGATCTTGAGCATTTGTTGGAGAAGGAACGTGAACTATTAGATGAATCAAAAGACTCCATAATTGTCGAGAGGATGGATACCTTGGGGAGAATATTTGCTGCTGGGATTTCCCGATGGAGGGATCACAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41280.p2 GENE.R_Transcript_41280~~R_Transcript_41280.p2 ORF type:complete len:140 (+),score=43.36,SWIRM-assoc_1|PF16495.1|3.2e-22 R_Transcript_41280:1559-1978(+)
MSSHSIPTPEPFRALQPEDMEMKDASHSSEVDKLSTSRDSIPLALRMRAAVGTALGAAAARARLLADQEEREIEHLMAFVIENQLKKLQRKAKFFDDLEHLLEKERELLDESKDSIIVERMDTLGRIFAAGISRWRDHR*

Click here to download the sequence:
Link to NCBI Protein BLAST