Transcript Information: R_Transcript_413555.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28744820401132
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.77120834479512
Replicate 20.35213987151473
Replicate 30.14292606787706
Condition 3: 24 Hour
Replicate 10
Replicate 20.17366345583132
Replicate 30.34468826278579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_413555.p1 GENE.R_Transcript_413555~~R_Transcript_413555.p1 ORF type:internal len:127 (+),score=42.18 R_Transcript_413555:1-378(+)
GTGATGGATGTGGAGAATTCTCCAAGTGGAACGAACAATTATTCAGTTCCTATCCAAGTTGCTCGAGTATCAGAGTTTGGCAAGAATGACAAGAGTTTTGCTTTGAGAAGTCATGTTCTTCATCAGAATTTGAAGGGTGGGGACTTAGTTTTTGGTTATGACATGCGAGAGGCAAATATCAACAATATGGAAGTTGAGAAAATCAGGGATGCACAGCAACTTGATCTGGTTTTGGTCATAAAGAAAGATGATTGGATTCTTCGATGTGAAAAGGCTGCTGCTATGGAGGAGAAAAGTCCAGAGTATCAGTATCAAGAGTTTCTGAAAGACTTGGACAAAAATAGTGAGGCTATGTTCAACCTGTCATTAGGTAGTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_413555.p1 GENE.R_Transcript_413555~~R_Transcript_413555.p1 ORF type:internal len:127 (+),score=42.18 R_Transcript_413555:1-378(+)
VMDVENSPSGTNNYSVPIQVARVSEFGKNDKSFALRSHVLHQNLKGGDLVFGYDMREANINNMEVEKIRDAQQLDLVLVIKKDDWILRCEKAAAMEEKSPEYQYQEFLKDLDKNSEAMFNLSLGSG

Click here to download the sequence:
Link to NCBI Protein BLAST