Transcript Information: R_Transcript_413607.p1


Annotated TAIR IDAT5G66280.1
Annotated Gene NameGDP-D-mannose 4,6-dehydratase 1
Annotated Gene Symbol(s)GMD1
Annotation TypeHomolog
Chromosome Positionchr5:26476434-26477519 | Forward length=361
E-Value6E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.51842717077279
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_413607.p1 GENE.R_Transcript_413607~~R_Transcript_413607.p1 ORF type:internal len:162 (+),score=32.65,GDP_Man_Dehyd|PF16363.1|2e-67,Epimerase|PF01370.17|1.6e-30 R_Transcript_413607:3-485(+)
CCATTCTATCCACGTTCTCCATATGCTTGCGCAAAGTTGTACAGTTATTGGATTGTTATTAACTATAGAGAGGCTTACAATATGTTTGCCTTGAACGGAATTCTTTTCAATCACGAAAGTATTCGTCGTGGTCCAACTTTTGTTACAAGAAAGATTACTATGGCTGTTGCTCGTATTCATCTCGGATTGCAAGATTGTTTGTATTTGGGTAATTTGGATGCTGAAAGAGATTGGGGTCATGCTAAGGACTATGTTGAAGCCATGTGGTTGATGCTCCAACAAGAAAAGCCAGCAGATTATTGTGTTGCTACTGGTGAAAAACACAAAGTAAGAGAATTTGTTGAAAAATCATTTGCTGTTCTTGGTAAGAAGGTTGAATGGAAGGGTACCCCAGGTACTGTTGATGAACATGGTGTTGTTGATGGTGTTGTCAGAGTTAAGGTTGACCCACGTTACTTTAGACCAACTGAAGTTGAACTCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_413607.p1 GENE.R_Transcript_413607~~R_Transcript_413607.p1 ORF type:internal len:162 (+),score=32.65,GDP_Man_Dehyd|PF16363.1|2e-67,Epimerase|PF01370.17|1.6e-30 R_Transcript_413607:3-485(+)
PFYPRSPYACAKLYSYWIVINYREAYNMFALNGILFNHESIRRGPTFVTRKITMAVARIHLGLQDCLYLGNLDAERDWGHAKDYVEAMWLMLQQEKPADYCVATGEKHKVREFVEKSFAVLGKKVEWKGTPGTVDEHGVVDGVVRVKVDPRYFRPTEVELL

Click here to download the sequence:
Link to NCBI Protein BLAST