Transcript Information: R_Transcript_41384.p1


Annotated TAIR IDAT5G12400.1
Annotated Gene NameDNA binding;zinc ion binding;DNA binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4013813-4021018 | Forward length=1602
E-Value1e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2674282866542
Replicate 22.3745119690855
Replicate 33.4455816996998
Condition 2: 8 Hour
Replicate 13.710392905655
Replicate 24.6216641577047
Replicate 36.0673907366196
Condition 3: 24 Hour
Replicate 16.2158742688937
Replicate 24.3619035688886
Replicate 35.6578802087579


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41384.p1 GENE.R_Transcript_41384~~R_Transcript_41384.p1 ORF type:complete len:1795 (+),score=415.72,DDT|PF02791.13|2.3e-12,PHD|PF00628.25|4.9e-06,PHD|PF00628.25|10,PHD|PF00628.25|0.0046,WHIM1|PF15612.2|1.4e-05 R_Transcript_41384:209-5593(+)
ATGGAGTTTGTGGGGAAAAAAGTGAGAAAGGAGTTCGAAGGGTTCGGGACTTTCGAAGGTGTAGTTGAATCATACGATTCTTCAACTGGTTTCTTCAAAATCTTGTATGAAGACGGCGATTCCGAGGAAGCTGATTACGCTGAGGTTTCTCGCTTGGCCGGAAACCTAATCTCCGGTACGGAGGAGAAGGTCGTCGCGAAAAGAGTTGGTCGGAAACCTAAAAAACGTTTTGGGCGTGATCCAGTTCCAGGTAAGGGTTCTGAAATTCATGTAGTTGACAGTGATTTGGATGTCAATAACTTAGAAAAATTAGAGAAATTAGAGAACTTAGATAGAACTGCAACTGGATTAGGTCAGAATGAGGTCAGTGTGTGTGGAAATGGGAATTTGGACTTGAACATAGGGTTTGATTTGGAGGAGAATATTGAAATTAAGGGGATTGACTTGAATTTGACTGTAGAAAATGGCGAATTGGATGGAGGGGTGGATAAGGGGAAGAAAGAACGCGAATTCGATTTGAATTTAGGGTTAAATGATGAGAGTTTGAATGATGCTGATTTGCAAACTTGTGGGGGTGACATTGCATGTGGAATTATGGAGAATTCTGGTTTAGATGCTAGTGGTGCTACTAGTAACCATGTAGATAGCGGTAGGGTTTCGGATGCTCAGTTGGAGGAGGATGGGAATGAGAATTCAGGGCGTAGGAAGAGAAGAAAAGTCGCAAGAAGTTTGAATTCTCCTGGTGAAACCGTGTTAAGAAGAAGTGCACGACAGGCAAAAGCCGCTGCCTTGAGTGAAAGTAAGGAGTCCAGGGCATTGGTAGTGGATGAAGCTAATGATTTGTCGATGTCTGGGGTTACCGATGAGTCTGAAGAGAAGCCTAATTTGGGAAGGCTTGAAGAAGAAACTGGATTAGTCATTCCTTCTCCTGTGGTGGAATTGCCACCTTCTTCTACTAAGTTGAATTTAGATGGAATTCCTGTATTAGACCTTTTCTCTGTATATTCTTGTCTCAGGTCATTTAGTACCTTATTGTATTTGAGTCCCTTTGAATTGGAGGATTTCGTAGCAGCATTGAAGAACAGGGTGTCTAACTCGCTAATCGATTCTATTCATGTTGCTATATTGCAATTGTTGAGAAAACATCTGGAGTTTCTTGCAAATGAGGGGTGTGAATCAGCATCTTCTTGCTTGAGGAATATGAACTGGGATTTGCTGGATGTAGTTACCTGGCCTGTGTTTATGGTTGAATATCTATTGGTTCATGGTTCAGGGATAAAACCTGGTTTCAGTCTTGAAAGCTTGATGTTATTTGATGGCGAATACTACAAGCAACAGCCGGAGGTGAAATTAGAACTGCTTCGTTGTCTCTGTGATGATGTCATGGAAGTAGAGGCTATTAGATCGGAGCTTGTTAAAAGGATGAATATGGCTGATGCTGCTGTGGAAATTGAGCGGATGACTGTCAGTGGTTCCACTAGGAAAAGGAGGACTTCCACAGACACTCCTGGAGATTCTTGCTTGAATGATGATGTGATCGAGGAGGTTGCTGATGGGAACAGTGATGAGTGTTGCCTTTGTAAGATGGACGGAAACTTAATATGCTGTGATGGTTGTCCGGCTGCTTACCATTCAAAGTGTGTTCGGATTGTCAGCTGTCGTTTTCCAGATGGTGATTGGTACTGTCCAGAATGCTTGATTGGCAGACTGAATTTTGGTACTAAACCTCAGAAATCGATGCGAGGCGCAGAGTTTCTTGGCAATGATCCCTATGGCCGGTTGTATTTCAGCTGCTTTGACTACCTTTTGGTGTCAGATTCTTATGATGCTGAAGCTTCATTCAATTATTACCATAAGGATGAACTGGGTGCTGTGATTCAACTCCTATTATCATCTGATATTCATTATGGCTCAATCCTGAGGGCAATTTCTAAACGTTGGGCCATTGCAGTCTTGCCTGAGGTGAAAGGTGAATTGGAATTTGACCCTCGTACCTTGAAGGATGGAAAGCTTGATGGAAGGAAAAGGAGGAGTTCCGTCATCCCTGAAAACTCTAATCCCTTGTTAAGTGTGGATACTGTCAAGCACAGCTCAGAGACAGAAAACCCACATACAAGTTCTGAAGGTTCAGCTGAAGTCTTGCAGGCAGACCAGTTGATCGCAAATTCTCCTGGATCTGGGCCCGATATAGCTTGTCAAGCTGCATTGAAAAAGAGCATTTCAGCTTCCAAGCAACAGAAGAAAAACGGTTCTTCAGCTGGACGACGCAAATCTTCTTTGAAGACTAAAGAAGAGGATGTGTTGCAAGAACAAGCTGAAGATAGTTATAGAAACTGTTATAGCTTTGCTAGGACAGCTTCTTCTGTTGTTGATGAGTTATTGCGGAAACCTTCAGATAAAGTAAATATAGATATTCCAAAGACTGAAGAGGAAATAATATCAATCCAATTGAAGTTCATTTTGAAGAAATCAAGCAAGTTTTGTTGGATAACTGCTAAAGATTCCAATGTAGAGAGACAGAAAGAAAAATGTGGGTGGTGCTACTGTTGCAGGTTTCCTGTTGAAGGCAGAAACTGCTTATTTAACTTCATGAACCGAGGTCCTGTTGCTGAAGGTCTTAAAGCTGTTGTTGATGCAGTCATGTCAAAGAAGAATAAGAAGGGGCATCTTGTAGATGTCATTTGTTATATTCTCTGTATGGAAGAGCGCTTGCGGGGACTTCTCTTGGGTCCATGGCTAAGTCCCCAATATAGCGAGCTTTGGCGCAAAAGCGTTCTTAAAGCATCTGATGTGTCATCTCTGAAGCGTCCTCTTCTCATGCTTGAGTCCAATTTAAGTCCTTTGGCTCTTTCAGCGGACTGGTGGAAGCATGTTGATTCTGCTACAACAGTTGGTTCTGCTTCCCACTTTGTAGCCAGTTCACGATTTGGTTCAAAGAATGGAGTTAACAGAAGAAAGGGTAGATTTGCAGATCCTGACTTTAAATCCTTGAGTGCTGGCAGTGGATTGGGTTTGTTTTGGTGGAGAGGAGGCAAGATTTCTCGTAATGTCTTCAATTGGAAAGTTGTTCCTCACTCCTTGGCTTTGAAGGCTGCCCGGAAAGCTGGCGGCATAAAGATACCAGGTATACAATATCCTGATGGTTCAGAAAATGCAAGGCGAGGCAAATGTGTCGCATGGCGGGCTTCTGTGGAAGCATCTACAAGTGTTGAGCAGCTAGCTTTGCAGGTTAGAGAGCTTGATTTTTTTGTTCGGTGGGATGATATTGAAAATACTCATCCGCATTCTATATTGGATAAGGAGTCTCTAAAAGCAATCAGACTTTTTAAGAAAGCCATAATCAGGAGGAATTGTGTACAGGAATCACATGTAAAATATCTTATAGACTTTGGTAAGAGAAGAAGTATTCCCGATGTTGTTATCAAACATGGGCAAAAGCTTGAGGATTCCTCAGATGAAAGGAAAAGATATTGGTTGGATGAGTCTTACGTGCCTCTACATCTCTTGAAGAGCTTTGAAGAGAGAAGAATTACTCGCAAGGCTGGGAAGAAAAAATCCAGTAAAGTGGTGAAGGGTGGGAGAGTGATAAAGAAGCATCCAAGGGATAAAGGTTTTGACTATCTTTTCTCAAGAGCGGAAAGGGCTGACAGTTATCAATGTGGACATTGTAACAAGAATGTCCCTATCAGTGAAGCTGTGAGCTGCCAGCTCTGTGAAGGATTCTTCCATAAAAGGCATGTCATGAAGTCTTCAGAGGGATTTACTTCCAGATGTACATATACATGCCATAGATGCCGGGCTGGAAAGCATACTAAGACTGAGAGCATCGCGGTAAAAAGAAAGTCAGGAAGACTTCAGGCTGCTAAGAATTTGAAGGTTGATAGCAGAGCAAGGGCTGCAGTTTCGAGAGCTAAGTCAAGTAAAAATGGGAAAGCCATGGCAAAATGTCGGCGGGTGAATACGGGTAAGAATAGAAAGGTGCAGCAACATGAGGAGCATTTACCTCAGGAAAATGCAAGTCTCTCTGTTGGTGTAAACTTGCGTCGTTCAGCAAGGAGAGCTAAGTACATGCCTCCGCAACCCAATAGTGTTACTGGAGCCAGGAAGAGGAAGAGATCTAAGTCTAGGAATGTGGGGTCAAAAAAATCATCAAAAGGCTCTTCTTGGCAGAAGAGAAGAACACAGGTTCTCCATCCGTTCTGGCTTAATGGACTTCACTTGTCCAGGAAGCCAAATGACGAACGGGTGGTACAATTTAAGAGAAGAAAACTCCTTGTTCTATCTGAGTTCTTGGATGGGAATGGTGATAAGCCCAAATGCTCCTTGTGTTCAGAGAATGGATTTATGGAAGCTTCGATGTATATTGGTTGTGAAATATGTGGAGATTGGTTCCATGGTGATGCATTTGGACTCAGCCCAGGTATTTCCGAGAGTCTTATTGGGTTTAAATGCCATGTATGCCGTGAGAAGAGTCCTCCTGTCTGCCCTTTTGTTGACATTTCTGGGGATACCAAGGCCCTTTGTACTGAAGCTGCAAGCAAGGATGGGACTCAGGATGCTCAGGGATTACCTGAAGTTCTCAAAGTTCTCCAGGAAACTTATTCTGCGGATGACTTATACTCAGACGAAATTCCTACACGTCTCGTAGAGGTTCAGGCAGTGCAAAATTCTGATGGAAACCTTGAACATGACAAGACTCCTTTTCCGGTCTCTGAGTTGAGGCTGGAAAATGGGTCACCTTGCAGCAAGGAGTTGGAAGTGAATGTAACTGAGTCTCAAAATGGGTATTTGATAGCTGATGTAACAAGTGCTTCCTGTGAGAATATATTAGAAGGGAACAAAAGTAATCCACTTGAATCAGAGTTAATGACACTTGATGAAGCAGGACACCAGTCCTGCACTTCTGTTTTGGATGGAATGGATGCACACGATCCTGGAATAGCTGAAGGGTCATCCGGTGGCAAGGAGGTTGAAGCCGATGTACTTAAGAGTCAAAATTGGGACCTGAGCGTTGATGTACCAACTGTTTCTTGTGAGAATATACTACAAGGGAGCAGAAGTAATCTAATTGAATCACAGTTAGTGACACTTGATGAAACAGGATGCCAGTCCTGCAAGTCTGTTTCCGATGGGATGGATGCGAACAATTCTGGAATAGCTGAAGGGTCACCGGTTGGGAAGGAGGTTAAAGTGAATGCGATTGTGAGTCAAAATGGGGTCTTGAAAGCTGATGTACCAGCTGCTTCTTGTGAGATTATATTAGAAGGGAACACAAGTGATCCAGTGGAATCACAGTTAATGGCAATTGATGGAACAGGATGTCAATCCTTCAAGTCTGTTGCAGGTGTGATGGATGCAAAAAATTTTGAAACAGCTGAAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41384.p1 GENE.R_Transcript_41384~~R_Transcript_41384.p1 ORF type:complete len:1795 (+),score=415.72,DDT|PF02791.13|2.3e-12,PHD|PF00628.25|4.9e-06,PHD|PF00628.25|10,PHD|PF00628.25|0.0046,WHIM1|PF15612.2|1.4e-05 R_Transcript_41384:209-5593(+)
MEFVGKKVRKEFEGFGTFEGVVESYDSSTGFFKILYEDGDSEEADYAEVSRLAGNLISGTEEKVVAKRVGRKPKKRFGRDPVPGKGSEIHVVDSDLDVNNLEKLEKLENLDRTATGLGQNEVSVCGNGNLDLNIGFDLEENIEIKGIDLNLTVENGELDGGVDKGKKEREFDLNLGLNDESLNDADLQTCGGDIACGIMENSGLDASGATSNHVDSGRVSDAQLEEDGNENSGRRKRRKVARSLNSPGETVLRRSARQAKAAALSESKESRALVVDEANDLSMSGVTDESEEKPNLGRLEEETGLVIPSPVVELPPSSTKLNLDGIPVLDLFSVYSCLRSFSTLLYLSPFELEDFVAALKNRVSNSLIDSIHVAILQLLRKHLEFLANEGCESASSCLRNMNWDLLDVVTWPVFMVEYLLVHGSGIKPGFSLESLMLFDGEYYKQQPEVKLELLRCLCDDVMEVEAIRSELVKRMNMADAAVEIERMTVSGSTRKRRTSTDTPGDSCLNDDVIEEVADGNSDECCLCKMDGNLICCDGCPAAYHSKCVRIVSCRFPDGDWYCPECLIGRLNFGTKPQKSMRGAEFLGNDPYGRLYFSCFDYLLVSDSYDAEASFNYYHKDELGAVIQLLLSSDIHYGSILRAISKRWAIAVLPEVKGELEFDPRTLKDGKLDGRKRRSSVIPENSNPLLSVDTVKHSSETENPHTSSEGSAEVLQADQLIANSPGSGPDIACQAALKKSISASKQQKKNGSSAGRRKSSLKTKEEDVLQEQAEDSYRNCYSFARTASSVVDELLRKPSDKVNIDIPKTEEEIISIQLKFILKKSSKFCWITAKDSNVERQKEKCGWCYCCRFPVEGRNCLFNFMNRGPVAEGLKAVVDAVMSKKNKKGHLVDVICYILCMEERLRGLLLGPWLSPQYSELWRKSVLKASDVSSLKRPLLMLESNLSPLALSADWWKHVDSATTVGSASHFVASSRFGSKNGVNRRKGRFADPDFKSLSAGSGLGLFWWRGGKISRNVFNWKVVPHSLALKAARKAGGIKIPGIQYPDGSENARRGKCVAWRASVEASTSVEQLALQVRELDFFVRWDDIENTHPHSILDKESLKAIRLFKKAIIRRNCVQESHVKYLIDFGKRRSIPDVVIKHGQKLEDSSDERKRYWLDESYVPLHLLKSFEERRITRKAGKKKSSKVVKGGRVIKKHPRDKGFDYLFSRAERADSYQCGHCNKNVPISEAVSCQLCEGFFHKRHVMKSSEGFTSRCTYTCHRCRAGKHTKTESIAVKRKSGRLQAAKNLKVDSRARAAVSRAKSSKNGKAMAKCRRVNTGKNRKVQQHEEHLPQENASLSVGVNLRRSARRAKYMPPQPNSVTGARKRKRSKSRNVGSKKSSKGSSWQKRRTQVLHPFWLNGLHLSRKPNDERVVQFKRRKLLVLSEFLDGNGDKPKCSLCSENGFMEASMYIGCEICGDWFHGDAFGLSPGISESLIGFKCHVCREKSPPVCPFVDISGDTKALCTEAASKDGTQDAQGLPEVLKVLQETYSADDLYSDEIPTRLVEVQAVQNSDGNLEHDKTPFPVSELRLENGSPCSKELEVNVTESQNGYLIADVTSASCENILEGNKSNPLESELMTLDEAGHQSCTSVLDGMDAHDPGIAEGSSGGKEVEADVLKSQNWDLSVDVPTVSCENILQGSRSNLIESQLVTLDETGCQSCKSVSDGMDANNSGIAEGSPVGKEVKVNAIVSQNGVLKADVPAASCEIILEGNTSDPVESQLMAIDGTGCQSFKSVAGVMDAKNFETAEG*

Click here to download the sequence:
Link to NCBI Protein BLAST