Transcript Information: R_Transcript_414042.p1


Annotated TAIR IDAT1G67020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25011008-25012987 | Reverse length=659
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55795077154162
Replicate 20.18337380276243
Replicate 31.0002942181726
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.55485272638738
Condition 3: 24 Hour
Replicate 10.30075729992625
Replicate 20.28893352258398
Replicate 30.286738489348


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414042.p1 GENE.R_Transcript_414042~~R_Transcript_414042.p1 ORF type:5prime_partial len:229 (+),score=41.40,Retrotrans_gag|PF03732.13|1.9e-10 R_Transcript_414042:2-688(+)
TCGGGGCAAATTTTGGGATTAAGTCTTCAACATCAGGAATTGGCTTCTCAAGTGGCTAGAGGTAACTCTAATTCCTTTTCTGGTAATAGTAATGGATATGGAAGATTGTCTAAGGTAGAATTTCCCAAATTTAATGGTGAAAATGTGAAGAATTGGCTGTATAAATGTAAATTTTTCTTTGAAGTAGACAATATACCTGAACAGAACAAAGTGAAATTAGCATCTATACATTTGGAGGATAGGGCTTTATTGTGGCATCAAACTTATATGAAAGGGAAAGGAAATAATTGTCCTAATTGGACTGAGTATGCTGAAGCTATCTCAGTAAGATTTGGGGACACCTATGAGGACCCTATGGCTGAATTGAAAAATTTGAAACAAGATGACACATTTCAGAAATATCAGGATGCATTTGAATTGTTGAATAAAGTTGATTTGAGTGAAGATTATGGTGTCAGTTTATATATGGGAGGATTGACAGTGGAGATTGGTATGTCAGTAAGAATGTTTAGGCCAAAATCTTTACCAGATGCTTATTGTCTTGCCAAGTTGCAAGAAGCTACCTTAAATGCCACCAGAAAGAAATCTAAAGCCATTTTACCACTACCCAAACCATCATACAATCCTAACTTCAGAAACCAGAACTTCAAACCTCTCATGACCACCACCAACACCACAAATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414042.p1 GENE.R_Transcript_414042~~R_Transcript_414042.p1 ORF type:5prime_partial len:229 (+),score=41.40,Retrotrans_gag|PF03732.13|1.9e-10 R_Transcript_414042:2-688(+)
SGQILGLSLQHQELASQVARGNSNSFSGNSNGYGRLSKVEFPKFNGENVKNWLYKCKFFFEVDNIPEQNKVKLASIHLEDRALLWHQTYMKGKGNNCPNWTEYAEAISVRFGDTYEDPMAELKNLKQDDTFQKYQDAFELLNKVDLSEDYGVSLYMGGLTVEIGMSVRMFRPKSLPDAYCLAKLQEATLNATRKKSKAILPLPKPSYNPNFRNQNFKPLMTTTNTTNS*

Click here to download the sequence:
Link to NCBI Protein BLAST