Transcript Information: R_Transcript_41447.p1


Annotated TAIR IDAT4G35730.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16931111-16933241 | Forward length=466
E-Value4.6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8189901088369
Replicate 22.7562710971202
Replicate 31.5919740414314
Condition 2: 8 Hour
Replicate 11.701720343824
Replicate 20.77701906011842
Replicate 31.9623362832851
Condition 3: 24 Hour
Replicate 12.5705652880441
Replicate 23.2359067098144
Replicate 34.2254256152311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41447.p1 GENE.R_Transcript_41447~~R_Transcript_41447.p1 ORF type:complete len:259 (+),score=40.91,Ist1|PF03398.10|4.3e-62 R_Transcript_41447:245-1021(+)
ATGTCAGTGGCATATGCAGTGAGAAGCCATTGTAGGAAGCTGGTGAAGCTGGGTTCCATTTTTCGCCGAGACTTCAATTCCTCCAAATGCAAGACATGGGCAAAGATGACAACGGCGAGGATAAAGTTGCTGAGGAACAAGAGAGAGACGATTGTTCGTCAAATGAGGCGTGACGTGGCTTTGCTTCTTCAATCGGGTCAACCTTCCACTGCTCGTATCCGGGTGGAACATGTGATTAGAGAACAGAATATGATGGCTGCCAATGAGATCCTTGAGCTCTTCTGTGAGAGAATTGTCACTAGACTCTCTATTATTGCAAAGCAAAGGGAATGCCCTGCAGATTTGAAAGAAGCGATCTCTAGTTTGATATTTGCTGGGCCAAGATGTTCTGATATTCCAGAACTGCAGGCAATACGAGACATCTTTCAGAAGAAATATGGCAAAGACTTTGTGTCTGCAGCTACTGATTTACGTCCCAACTGCGGTGTTAATCGCCTGCTAATTGAAAAGCTCTCAGCCTTAAATCCTCCTGGCGAACTGAAGCTCAAAGTGATGAAGGAAATAGCTAAGGAATACCAGGTTGAGTGGGATACAACCGAGACAGAGATGGAGCTTCTCAAGCCCCCAGAGGAGCGCATAGTTTGTTGTACTTCTCTTTGTTTAGTCCTTATTATGAGTATGTTTGGCCTAATTTTTCCTATAAACTATTTATCCCTATCACAAATCTTGTATCCTCCCCCCTCATCATTCACATTCTCCCTCATTTTTAGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41447.p1 GENE.R_Transcript_41447~~R_Transcript_41447.p1 ORF type:complete len:259 (+),score=40.91,Ist1|PF03398.10|4.3e-62 R_Transcript_41447:245-1021(+)
MSVAYAVRSHCRKLVKLGSIFRRDFNSSKCKTWAKMTTARIKLLRNKRETIVRQMRRDVALLLQSGQPSTARIRVEHVIREQNMMAANEILELFCERIVTRLSIIAKQRECPADLKEAISSLIFAGPRCSDIPELQAIRDIFQKKYGKDFVSAATDLRPNCGVNRLLIEKLSALNPPGELKLKVMKEIAKEYQVEWDTTETEMELLKPPEERIVCCTSLCLVLIMSMFGLIFPINYLSLSQILYPPPSSFTFSLIFSF*

Click here to download the sequence:
Link to NCBI Protein BLAST