Transcript Information: R_Transcript_41460.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.08591495295
Replicate 232.290862019548
Replicate 330.805612629308
Condition 2: 8 Hour
Replicate 115.87359520718
Replicate 216.192362712583
Replicate 312.768719195031
Condition 3: 24 Hour
Replicate 18.8664634810444
Replicate 212.472629165706
Replicate 312.528824062155


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41460.p1 GENE.R_Transcript_41460~~R_Transcript_41460.p1 ORF type:3prime_partial len:145 (+),score=18.32,zf-RING_2|PF13639.2|3.1e-12,zf-rbx1|PF12678.3|9.9e-08,zf-C3HC4_2|PF13923.2|5.1e-07,zf-RING_11|PF17123.1|3.8e-06,zf-RING_11|PF17123.1|1.6e+04,zf-C3HC4|PF00097.21|7e-06 R_Transcript_41460:122-553(+)
ATGGCCGATTTCTTTGTGCCCGTTACAGTGGTCCTCTTTATATTCTTTCTCGCCTCTTTTTTCTACTGGACAGTTCGGGCCCGAATGTTGGTCCTAGCAGATAATCAAGCAGCCACAGCGGCCCAAGCCCAGCTCCAAGCCCAAATTCAAGCCCTTAATCTGGGCCCACAACAGCCGGAACTCAAGGGGCTTAACCAGCGTATCATAGATAGCTATCCAACGGTGGTGATTGGAGAAAGTGGAAGGATGATCAAGCCGGATGATGACACGTGTCCCATATGTTTGGCTGATTATCTTGCTAATGATATCCTCAAGATATTGCCAGAATGTTTGCATAGATATCATGCTGAGTGCTTGGATGAATGGTTAAGGTTCAATGCTTCCTGTCCTGTTTGTAGAGTTCATCCCCCTCATACTACTTCTCAGCCTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41460.p1 GENE.R_Transcript_41460~~R_Transcript_41460.p1 ORF type:3prime_partial len:145 (+),score=18.32,zf-RING_2|PF13639.2|3.1e-12,zf-rbx1|PF12678.3|9.9e-08,zf-C3HC4_2|PF13923.2|5.1e-07,zf-RING_11|PF17123.1|3.8e-06,zf-RING_11|PF17123.1|1.6e+04,zf-C3HC4|PF00097.21|7e-06 R_Transcript_41460:122-553(+)
MADFFVPVTVVLFIFFLASFFYWTVRARMLVLADNQAATAAQAQLQAQIQALNLGPQQPELKGLNQRIIDSYPTVVIGESGRMIKPDDDTCPICLADYLANDILKILPECLHRYHAECLDEWLRFNASCPVCRVHPPHTTSQPA

Click here to download the sequence:
Link to NCBI Protein BLAST