Transcript Information: R_Transcript_414615.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.18410424772365
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414615.p2 GENE.R_Transcript_414615~~R_Transcript_414615.p2 ORF type:5prime_partial len:133 (-),score=17.60,gag_pre-integrs|PF13976.2|1.7e-11 R_Transcript_414615:855-1253(-)
GTCCTTGATCAAGAGGGTTACAAGCATACTTTCGGCGAGGGTAAGTGGAAATTGTCTAAAGGCTCTTCGACTGTTGCTCGTGGCAATCTTTGTTGCACCTTATACAAGACATACTTGAAAGTATGTGCTGGTGAGTTGAATGCAGTTGAAGAGAAAACCTCTCCTAACTTATGGCATCGGAGATTGGGGCATGTCAGCGAGAAAGGGATAAAGTTGCTAGGTGGTAAGTCACTTATTCCTACAGATGTTACTATTTCACTTGATCCTTGTGATCACTGTTTGGCAAGAAAGCAACATAGAGTATCCTTTACGGGGAGATCTACAAGAAAAAAAGGTGAAGTTGGAGTTGGTTCACTCCGACGTTTGTGGTCCTATAGAGGTGGAATCACTTGGAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414615.p2 GENE.R_Transcript_414615~~R_Transcript_414615.p2 ORF type:5prime_partial len:133 (-),score=17.60,gag_pre-integrs|PF13976.2|1.7e-11 R_Transcript_414615:855-1253(-)
VLDQEGYKHTFGEGKWKLSKGSSTVARGNLCCTLYKTYLKVCAGELNAVEEKTSPNLWHRRLGHVSEKGIKLLGGKSLIPTDVTISLDPCDHCLARKQHRVSFTGRSTRKKGEVGVGSLRRLWSYRGGITWR*

Click here to download the sequence:
Link to NCBI Protein BLAST