Transcript Information: R_Transcript_414621.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.46276237567985
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.55004880667839
Condition 3: 24 Hour
Replicate 10
Replicate 20.22278039283411
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414621.p1 GENE.R_Transcript_414621~~R_Transcript_414621.p1 ORF type:5prime_partial len:99 (+),score=13.06,gag_pre-integrs|PF13976.2|1.2e-08 R_Transcript_414621:1-297(+)
CCAGACTTACGCCTCAATTTATTGTCTGCAAATGTCCTTGATCAAGAGGGTTACAAGCATACTTTCGGTGAGGGTAAGTGGAAATTGTCTAAGGGTTCTTTGACTGTTGCTCGTGGTAATCTTTGTTGCACCTTATACAAGACAAACTTGAAGGTATGTGCTGGAGAGTTGTATGCAGTTGAAGTGAAAACCTCTCCTAATTTATGGCATCGAAGATTGGGGCATGTCAGCGAGAAAGGGATAAAGTTGCTAGCTGGTAAGTCACTTTATTCCTGCAGATGTTACTATTTCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414621.p1 GENE.R_Transcript_414621~~R_Transcript_414621.p1 ORF type:5prime_partial len:99 (+),score=13.06,gag_pre-integrs|PF13976.2|1.2e-08 R_Transcript_414621:1-297(+)
PDLRLNLLSANVLDQEGYKHTFGEGKWKLSKGSLTVARGNLCCTLYKTNLKVCAGELYAVEVKTSPNLWHRRLGHVSEKGIKLLAGKSLYSCRCYYFT*

Click here to download the sequence:
Link to NCBI Protein BLAST