Transcript Information: R_Transcript_414727.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34439548971167
Replicate 20.22637520664472
Replicate 30.61743228021974
Condition 2: 8 Hour
Replicate 10.26399854390561
Replicate 20.54244726838456
Replicate 31.1742281802946
Condition 3: 24 Hour
Replicate 10.80445146619987
Replicate 20.41613696019957
Replicate 30.82595112026028


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414727.p1 GENE.R_Transcript_414727~~R_Transcript_414727.p1 ORF type:complete len:371 (+),score=17.32,zf-RING_2|PF13639.2|2.3e-14,zf-RING_11|PF17123.1|1.4e-11,zf-rbx1|PF12678.3|1.9e-08,zf-C3HC4_2|PF13923.2|2.9e-06,zf-C3HC4|PF00097.21|4.2e-06,zf-RING_5|PF14634.2|2e+03,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_414727:91-1203(+)
ATGAAGAGCAACAAGTACCAGAATAGGAGTATAATTAACAGATCCCCTGATGGAATTGTTAAATACTACCAGGTCATGTTGCTGTTAGTCCTATTTCTCTCTCCCATCGCGGCAGGGCAGCAGCCAAAGGATTCGGATGATAAATCATCATCCAATAACGACTTCAACACTCTCAACAACAGCAACGTTAGTCCATCAGTGACGGTGATAGTGATAGTACTAGTCGTAGCCTTCCTCTTCACCGGTTGCCTTGCAATCTACATCCAGCAATGCGTTGACAATTCCCCTTCTTCTACTAGGGGTTCGGTTGTCATCACCGGAGAAAACCGGTCAAGGAGAGTACAAACCAGAGGCCTTGACCGGTCCGTTATCGAGACTTTTCCGAGTTTCCTTTATTCAGCGGTTAAGGAATTGAAAATCGGAAAAGAAACGCTGGAATGCGCAGTTTGTCTCAACGAGTTTCAAGAAGACGAAACTCTCCGTTTGCTCCCTAAATGTGATCACGTTTTTCATGCTCAGTGTATCGACGCTTGGCTTGTGGGCCACACCACTTGCCCAGTTTGTCGAGCTAATCTTGGTCTTGATCCGGCTCAAACCGGAAACCCGGTCGAGTCCATTCACGAGCACGATTTAGAAGGTCATGACCCGGAGCTCCCTCTCTCCACCGATGTAGCTCAAAGCTACGACGACGTCGTTCAGGTAACAATCCCTGAAGAGACTACTAGGAAGAATGATAGGAATGACAAGTTTCCGAGATCGCACTCGACGGGTCACTCAGTGATTCAACCAGGAGATGACTGTGAGAGATTCAGGCTAAGGTTGCCGGCTGAGGTTCGAAGACAGCTGATGGCTCGGACGAAGCTGAAGAGAGCCACGAGCATGGTGGCTCTACCTCGAGAGTCGAGCTCAAGGAGAGGGTTTAGGATCAGTGGAGGAGGAGAAGGGAGTGGTAGTAGCCGTTATGGCCGGTTTTTTGGTCCGTTGATATCACGAGTGAATTCGTTAAGGTTAACGGCGAGGGGTACGGCTGACGGAGATTTAGCCACGTCCAATTCCACTTCCAAGAGGTTTTTGGGGACCGCCGTTAAGCCGTTGGAGTCCCTTCCTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414727.p1 GENE.R_Transcript_414727~~R_Transcript_414727.p1 ORF type:complete len:371 (+),score=17.32,zf-RING_2|PF13639.2|2.3e-14,zf-RING_11|PF17123.1|1.4e-11,zf-rbx1|PF12678.3|1.9e-08,zf-C3HC4_2|PF13923.2|2.9e-06,zf-C3HC4|PF00097.21|4.2e-06,zf-RING_5|PF14634.2|2e+03,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_414727:91-1203(+)
MKSNKYQNRSIINRSPDGIVKYYQVMLLLVLFLSPIAAGQQPKDSDDKSSSNNDFNTLNNSNVSPSVTVIVIVLVVAFLFTGCLAIYIQQCVDNSPSSTRGSVVITGENRSRRVQTRGLDRSVIETFPSFLYSAVKELKIGKETLECAVCLNEFQEDETLRLLPKCDHVFHAQCIDAWLVGHTTCPVCRANLGLDPAQTGNPVESIHEHDLEGHDPELPLSTDVAQSYDDVVQVTIPEETTRKNDRNDKFPRSHSTGHSVIQPGDDCERFRLRLPAEVRRQLMARTKLKRATSMVALPRESSSRRGFRISGGGEGSGSSRYGRFFGPLISRVNSLRLTARGTADGDLATSNSTSKRFLGTAVKPLESLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST