Transcript Information: R_Transcript_414737.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26263253172257
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.26117425353075
Condition 3: 24 Hour
Replicate 10.16516408077485
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414737.p1 GENE.R_Transcript_414737~~R_Transcript_414737.p1 ORF type:5prime_partial len:139 (+),score=22.60,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|7.9e-20 R_Transcript_414737:3-419(+)
ATTGTTGCTGTTAAAGATGATATGGTGCTGAAGTATGAAGATAGTAACAAGGCAAGGAAGCTGTTAATGGAGTGTTGCAAAGGGGGGAAATTTTCTGTACAAATGATGTATGATCACTGGAGAGATAAGGAGAGCAAGAAAACTTGGACAAATCTGGTTTGGTCAGCCTGTGCAATTCCCAGAGCACAATTTATAACATGGATTGCAATACATGGGAGGCTTAAAACCAATGACAGATTGAAGAAATTAGGGGTTATTGTCGATGATAGGTGTCCTTTGTGTAATTCTCATGCTGAATCCTGTGCACATCTATTTTTCTCTTGCCCTGGAGTGCTGATACTTTGGGGAGAATACCTTAATGGACTGGTACTAGCAGGAAGGTTTACAATCTGCAAAAGGAGATTAAATGGTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414737.p1 GENE.R_Transcript_414737~~R_Transcript_414737.p1 ORF type:5prime_partial len:139 (+),score=22.60,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|7.9e-20 R_Transcript_414737:3-419(+)
IVAVKDDMVLKYEDSNKARKLLMECCKGGKFSVQMMYDHWRDKESKKTWTNLVWSACAIPRAQFITWIAIHGRLKTNDRLKKLGVIVDDRCPLCNSHAESCAHLFFSCPGVLILWGEYLNGLVLAGRFTICKRRLNGF*

Click here to download the sequence:
Link to NCBI Protein BLAST