Transcript Information: R_Transcript_414772.p1


Annotated TAIR IDAT3G10300.3
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3186436-3188071 | Forward length=335
E-Value5E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38226096240249
Replicate 20.10992827443088
Replicate 30.11993056333064
Condition 2: 8 Hour
Replicate 10
Replicate 20.11707267979678
Replicate 30.095034610577942
Condition 3: 24 Hour
Replicate 10
Replicate 20.23094511927306
Replicate 31.0313578124716


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_414772.p1 GENE.R_Transcript_414772~~R_Transcript_414772.p1 ORF type:internal len:191 (+),score=14.18,EF-hand_1|PF00036.28|0.00021,EF-hand_1|PF00036.28|0.0014,EF-hand_1|PF00036.28|0.00097,EF-hand_1|PF00036.28|8.9,EF-hand_1|PF00036.28|2.2e+02,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.024,EF-hand_6|PF13405.2|3.3e-05,EF-hand_6|PF13405.2|72,EF-hand_6|PF13405.2|2.6e+02,EF-hand_7|PF13499.2|3.7e-08,EF-hand_7|PF13499.2|2.8e-06,EF-hand_7|PF13499.2|2.3e+03,EF-hand_5|PF13202.2|2.5e-06,EF-hand_5|PF13202.2|1.4,EF-hand_5|PF13202.2|0.045,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|5.2e-06,EF-hand_8|PF13833.2|0.093,EF-hand_8|PF13833.2|58 R_Transcript_414772:1-570(+)
AAAAGAATGGCACACCAACAACCCCCCCAACAACAACAACAACAAAACAACGCATATAACCCCTCATACCAAACTGGAATGCAACAACAAGAATATCAACAAATTGCTGCGTTCTTCCAGCAGGTGGATGCTGATCGATCAGGTCATATCAGTGCTCAAGAACTCCACAGAGCGCTCTCTCTTGGTGGCAATAACTTCTCCATGGACGTCGTCAACCGCTTAATGTTAATTTTCGACCAAGACAGAAGCGGCCAAATTGGTTTAAACGAGTTTGTTTCACTTCACAAATACTTGCAAGCGATGAGAGAGTCGTTCACGTTCTTTGACAGAGATAGATCAGGATCATTGGATACTAATGAATTGCACCAAGCATTGGTGAGAGCTGGATACCAAGTCACTATTAACGCGGTCTACGCTGCTCTTCCTCGATTCGACAAACAAAGAAGAGGCCAATTATCATTTGATCAATATTTGGATTTCTGCATTTATTTGAGCAATTTGCGAAAAGTTTTCGCTTTCTACGATCCACAAATGAGAGGAAACATCACACTCACTTTTGATCAACCCGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_414772.p1 GENE.R_Transcript_414772~~R_Transcript_414772.p1 ORF type:internal len:191 (+),score=14.18,EF-hand_1|PF00036.28|0.00021,EF-hand_1|PF00036.28|0.0014,EF-hand_1|PF00036.28|0.00097,EF-hand_1|PF00036.28|8.9,EF-hand_1|PF00036.28|2.2e+02,EF-hand_6|PF13405.2|0.00019,EF-hand_6|PF13405.2|0.024,EF-hand_6|PF13405.2|3.3e-05,EF-hand_6|PF13405.2|72,EF-hand_6|PF13405.2|2.6e+02,EF-hand_7|PF13499.2|3.7e-08,EF-hand_7|PF13499.2|2.8e-06,EF-hand_7|PF13499.2|2.3e+03,EF-hand_5|PF13202.2|2.5e-06,EF-hand_5|PF13202.2|1.4,EF-hand_5|PF13202.2|0.045,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|5.2e-06,EF-hand_8|PF13833.2|0.093,EF-hand_8|PF13833.2|58 R_Transcript_414772:1-570(+)
KRMAHQQPPQQQQQQNNAYNPSYQTGMQQQEYQQIAAFFQQVDADRSGHISAQELHRALSLGGNNFSMDVVNRLMLIFDQDRSGQIGLNEFVSLHKYLQAMRESFTFFDRDRSGSLDTNELHQALVRAGYQVTINAVYAALPRFDKQRRGQLSFDQYLDFCIYLSNLRKVFAFYDPQMRGNITLTFDQPV

Click here to download the sequence:
Link to NCBI Protein BLAST