Transcript Information: R_Transcript_415266.p1


Annotated TAIR IDAT5G47460.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19252463-19254193 | Reverse length=576
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29922886811014
Replicate 20.17210082308441
Replicate 30
Condition 2: 8 Hour
Replicate 10.60211143312898
Replicate 20
Replicate 30.14878369360973
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.53822224639911


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415266.p1 GENE.R_Transcript_415266~~R_Transcript_415266.p1 ORF type:internal len:122 (+),score=23.91,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|1.3e-06,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|0.067,PPR|PF01535.16|0.00011,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|0.041,PPR_2|PF13041.2|1.4e-05,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.033 R_Transcript_415266:1-363(+)
GGTCACTTGTGTTTGTTGCCACTGGGGATGTCAATACAATCGAGAATTGTCATGTGTGGATTGGAATCAAGTGTTGTTGTGGCAAACTGTTTGATTGATATGTATGGAAAGTGCGGTTCAGTGGATGATGCCATTCGCATGTTTGATGGGCTGGTTGAGAAGGATGTGATTTCGTGGAACTCGGTTATTGCAGCTAGTGCTAGAAACCAAAGACTTCAACTTGCATCTGCCTATTTTTCTCAGATGCCGTGCCCTGATACCATTTCCTATAATGAACTTATCGGTGGCATTGCACAGTTTGGGGACATAGATGAGGCCATTGAGATCCTGAGGAGCATGAAGGAACCAAATTCATCGTCATGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415266.p1 GENE.R_Transcript_415266~~R_Transcript_415266.p1 ORF type:internal len:122 (+),score=23.91,PPR_1|PF12854.3|0.00017,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|1.3e-06,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|0.067,PPR|PF01535.16|0.00011,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|0.041,PPR_2|PF13041.2|1.4e-05,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.033 R_Transcript_415266:1-363(+)
GHLCLLPLGMSIQSRIVMCGLESSVVVANCLIDMYGKCGSVDDAIRMFDGLVEKDVISWNSVIAASARNQRLQLASAYFSQMPCPDTISYNELIGGIAQFGDIDEAIEILRSMKEPNSSSW

Click here to download the sequence:
Link to NCBI Protein BLAST