Transcript Information: R_Transcript_415287.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46462082430193
Replicate 20.38175091665997
Replicate 30.16659445524475
Condition 2: 8 Hour
Replicate 10.26711852669722
Replicate 20.24393689281293
Replicate 30.39603514080844
Condition 3: 24 Hour
Replicate 10.25044880612041
Replicate 20.24060282426084
Replicate 30.5571415738483


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415287.p1 GENE.R_Transcript_415287~~R_Transcript_415287.p1 ORF type:complete len:275 (+),score=44.71,RVT_1|PF00078.23|1.9e-17,RVT_1|PF00078.23|5.6e+03 R_Transcript_415287:1680-2504(+)
ATGGAATGTGTGTCAACTTCCAAGTTTCCTGTGAATATTAATGGGAGTCCGAAGGGTTATTTTGATGCGAAATGTGGGCTAAGGCAAGGTGACCCTATATCACCCTATTTGTTTGTTATCTGTATGAAAGGATTGTCTCGAATCTTGAGGAAATTTTCAAATGTCAAAGGATTTTCTTTTCACCCTAAGACAGTGAGAGTGAGATTTAATCATCTTATTTTTGCTGATGACCTGCTCATATTCACCAGAGGTGATGTTCCTTCTATTGATCTTGTTCTGAAAGGGATGAAAAGCTTTTCTCAAATGTCTGTCCTGCATATTGACTCTGATAAAACTGATATTTACATGGGAGGTGTGGAGTTGGGAGTTCAGCAGCAGATTTTATCTATATCAGGCTTTAAACAAGGAGCCTTGCCTGTTAGATATTTAGGAATGCCATTGAGTTCAGTGGGGATTTCTCATGATATGTGCCAAAGTTTGTTGGACAAGATAAGGAAAAAATTGAATCACTGGGGGCTGTGTACTCTTTCTCATGCTGGTAGGCTTGAACTACTAAATTCAGTTTTGTTTGGAATTGAAACTTTCTGGTGCTCAGCTTTCTTACTTCCAAAGAAGACCCAATTGGCAATTGAGAAATTATGCAGGCAAGTTTTATGGGGAATAAGGGAGAATGAGAGAAGGATGATCTTCATGTCATGGCACAACCTTAGTAAGGATAAGAATCAAGGAGGGCTGAATATAAAAGTTCTAAGCTGGAACAAAACTATTATTTTGAAATGGTTGGCCAAATTACAGATTACTGGCAGCACTTTATGGAGCGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415287.p1 GENE.R_Transcript_415287~~R_Transcript_415287.p1 ORF type:complete len:275 (+),score=44.71,RVT_1|PF00078.23|1.9e-17,RVT_1|PF00078.23|5.6e+03 R_Transcript_415287:1680-2504(+)
MECVSTSKFPVNINGSPKGYFDAKCGLRQGDPISPYLFVICMKGLSRILRKFSNVKGFSFHPKTVRVRFNHLIFADDLLIFTRGDVPSIDLVLKGMKSFSQMSVLHIDSDKTDIYMGGVELGVQQQILSISGFKQGALPVRYLGMPLSSVGISHDMCQSLLDKIRKKLNHWGLCTLSHAGRLELLNSVLFGIETFWCSAFLLPKKTQLAIEKLCRQVLWGIRENERRMIFMSWHNLSKDKNQGGLNIKVLSWNKTIILKWLAKLQITGSTLWSD*

Click here to download the sequence:
Link to NCBI Protein BLAST