Transcript Information: R_Transcript_415287.p3


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2920473752755
Replicate 20.67188161332154
Replicate 31.2827773053845
Condition 2: 8 Hour
Replicate 10.58766075873389
Replicate 20.17888705472948
Replicate 30.58085153985238
Condition 3: 24 Hour
Replicate 11.2856372047514
Replicate 20.70576828449847
Replicate 30.17510163749518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415287.p3 GENE.R_Transcript_415287~~R_Transcript_415287.p3 ORF type:complete len:125 (+),score=6.56,zf-RVT|PF13966.2|2.8e-06,zf-RVT|PF13966.2|5.5e+02 R_Transcript_415287:2835-3209(+)
ATGGCTAATAGGTGTGCCCTATGTTACCACAGTCAGGAGTCTGTTAAGCACTTATTTTTTGCCTGCTCTTATGCACAGAAGGTTTGGCGGAATGTTCTGACTTGGTTGAGAATTTATAGAAGAAATTTGAGCCTTAAAAGTGAACTAAAATGGTTCTATAAGCATGTTAGGGGCAAAAGCTGGGTCAAGAAGCACAGGAGGGGTGCACTTGTAGCTACACTGTATGAAGTATGGAGAGAACGGAACTGCAGGATTTTCCAGGGGAAGCAATATACTGTGCAGCACTGCTTTAATCAGATCCAATATATGGTCTCAGTAAGGATGTTGAGTTTTGAAGATCAAGATCATGATAATATAACTAGCTACTTACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415287.p3 GENE.R_Transcript_415287~~R_Transcript_415287.p3 ORF type:complete len:125 (+),score=6.56,zf-RVT|PF13966.2|2.8e-06,zf-RVT|PF13966.2|5.5e+02 R_Transcript_415287:2835-3209(+)
MANRCALCYHSQESVKHLFFACSYAQKVWRNVLTWLRIYRRNLSLKSELKWFYKHVRGKSWVKKHRRGALVATLYEVWRERNCRIFQGKQYTVQHCFNQIQYMVSVRMLSFEDQDHDNITSYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST