Transcript Information: R_Transcript_415419.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18625470361958
Replicate 20.64274389029484
Replicate 30.11687111018445
Condition 2: 8 Hour
Replicate 10.24985576476781
Replicate 20.57043065921392
Replicate 30.74088206613824
Condition 3: 24 Hour
Replicate 10.1171316695291
Replicate 20.56263415537187
Replicate 30.33501588806476


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415419.p1 GENE.R_Transcript_415419~~R_Transcript_415419.p1 ORF type:complete len:196 (+),score=28.29,zf-RVT|PF13966.2|3.2e-15 R_Transcript_415419:691-1278(+)
ATGGTTCAAAAAATTGTAAAGGCAGGACAATACATCCAAGGGGTGTGCAGTTGGGAGGAGATTATAAACCAGCAGAAAGTGAAAACCAAAGTAGCTTACTTGAAACTCCTAAGAAAGCAACAGAAGAAAGAATGGCGGAAACTGGTTATGGGGAATGCGGCCTGGCTTAGAGCTACCTTCATACTTTGGTTGACCTTATGGGAGAGATTAAGCACAGCTGATAGGTTGCAGAAATTTGGTATACAATGCCCCCTGCTGTGCTCCTTCTGCAAAGCTGAAATTGAAAATATCCAACATATAATATTTCAATGCCCCTGGACTGTATATGTTTGGAGACAGATGCTCAATTGGATGCATATTCCTTTCCCAACAGATACAAAGCAGACTCTTATCAAGTCCAGTAAACACAAAAGAAGGGGAAAGATGATGAGGCTCCTTGCTGCTGAGATAATTTATGCCATTTGGATGGAGAGAAACAAAAGAAGATTCAGGGGTCAATCAGGAACTGCTGCTGACCTGATTAGGGAGATTCAGCTCTATATCTGTATTAGAGCAGGAGCTGCAGGCATTACTATAATGCCGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415419.p1 GENE.R_Transcript_415419~~R_Transcript_415419.p1 ORF type:complete len:196 (+),score=28.29,zf-RVT|PF13966.2|3.2e-15 R_Transcript_415419:691-1278(+)
MVQKIVKAGQYIQGVCSWEEIINQQKVKTKVAYLKLLRKQQKKEWRKLVMGNAAWLRATFILWLTLWERLSTADRLQKFGIQCPLLCSFCKAEIENIQHIIFQCPWTVYVWRQMLNWMHIPFPTDTKQTLIKSSKHKRRGKMMRLLAAEIIYAIWMERNKRRFRGQSGTAADLIREIQLYICIRAGAAGITIMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST