Transcript Information: R_Transcript_415526.p1


Annotated TAIR IDAT5G40670.1
Annotated Gene NamePQ-loop repeat family protein / transmembrane family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16285968-16287591 | Forward length=270
E-Value1.8E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31652533447489
Replicate 20.1213658983601
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.12925365226119
Replicate 30
Condition 3: 24 Hour
Replicate 10.26540817604282
Replicate 20.38246113683082
Replicate 30.25303704840344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415526.p1 GENE.R_Transcript_415526~~R_Transcript_415526.p1 ORF type:5prime_partial len:173 (+),score=18.72,PQ-loop|PF04193.10|7e+03,PQ-loop|PF04193.10|3.5e-16,PQ-loop|PF04193.10|1.4e+03 R_Transcript_415526:1-519(+)
GTTGAAGCGAATGATGTGGCTTTCTCAATGCATGCAGTTCTCTTAACTGCATTTACTCTCTTGCAGATTTTCATCTATGAGCGGAAAAATCAGAGATTCTCGAAAATATCTATTGGAATTGTCTCTGCTGTATGGTTGTCAGCTGCAATCTGTGTTTTTGTAGCTATTCACAGACATTCATGGCTCTGGTTGATCTCCGTTTTCAACACGATTCAGATCGTAATGACAGTGATCAAATACATTCCACAGGCATTTATGAACTTCCAAAGGAAAAGTACAGATGGGTTCAGCATAGGAAACATTCTGCTTGATTTGCTGGGAGGTTTAACAAATTATGGACAGATGGTTGTACAATCAATAGACCAGAAATCATGGATCAACTTCTATGGAAACATAGGGAAGGCACTTCTATCATTGGTGTCCATATTCTTCGACATGCTGTTCATCATTCAACATTATGTGCTCTATCCAGCGAAGAAAAAGATGCTGCCTACTACTACTAGTACTTCTCAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415526.p1 GENE.R_Transcript_415526~~R_Transcript_415526.p1 ORF type:5prime_partial len:173 (+),score=18.72,PQ-loop|PF04193.10|7e+03,PQ-loop|PF04193.10|3.5e-16,PQ-loop|PF04193.10|1.4e+03 R_Transcript_415526:1-519(+)
VEANDVAFSMHAVLLTAFTLLQIFIYERKNQRFSKISIGIVSAVWLSAAICVFVAIHRHSWLWLISVFNTIQIVMTVIKYIPQAFMNFQRKSTDGFSIGNILLDLLGGLTNYGQMVVQSIDQKSWINFYGNIGKALLSLVSIFFDMLFIIQHYVLYPAKKKMLPTTTSTSQS*

Click here to download the sequence:
Link to NCBI Protein BLAST