Transcript Information: R_Transcript_41587.p1


Annotated TAIR IDAT1G07090.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH6
Annotation TypeOrtholog
Chromosome Positionchr1:2174202-2174792 | Reverse length=196
E-Value1.6E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.949257614498
Replicate 215.105935593626
Replicate 315.236608265314
Condition 2: 8 Hour
Replicate 110.525598054246
Replicate 211.939294376742
Replicate 313.141437553221
Condition 3: 24 Hour
Replicate 115.06281469691
Replicate 29.8799576025663
Replicate 313.964553669016


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41587.p1 GENE.R_Transcript_41587~~R_Transcript_41587.p1 ORF type:complete len:221 (+),score=20.77,DUF640|PF04852.8|3.4e-62 R_Transcript_41587:557-1219(+)
ATGGAAGCAGCAGGTGGAGGATCCGAGCCGAGTGGTGGCGTAGAAGGAGGCTCAACTCAACCCGGACCCGGAGGAGGAAGCGGGTCGAGTGAATTAGCGGGGTCATCAACATCAGGAGCAGGACCGCCAAGCAGATACGAGTCACAAAAGAGAAGAGACTGGAACACTTTCCTGCAATACCTGAAGAACCACAAGCCCCCGCTATCACTATCCCGGTGCAGCGGGGCCCACGTGATCGAGTTCCTCAAGTACCTGGACCAGTTCGGTAAGACCAAGGTCCACATCTCCGGGTGTCCTTACTTCGGACACCCCAATCCACCAAACCCCTGTGCTTGTCCTCTCAAACAAGCCTGGGGAAGCCTTGACGCTCTCATCGGCCGCCTTCGTGCCGCTTACGAGGAAAACGGAGGTCGTCCTGAGTCCAACCCCTTTGGTGCTCGTGCTGTCCGTATTTACCTCCGTGAGGTACGTGAAGCTCAGGCTAAAGCTCGCGGTATTCCTTACGAGAAGAAGAAACGGAAACGCCCTTCCGCCACTTCTACTACTACCTCTACCGCTCTACCTGATCAGGGTGCAGGTGGCTCCGCAGCCACCGCAAGCGTTGCTGCTGCTCATGATGATGGAGGTGCTGGTGTAGGTCCTCCTCCTACAACCACTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41587.p1 GENE.R_Transcript_41587~~R_Transcript_41587.p1 ORF type:complete len:221 (+),score=20.77,DUF640|PF04852.8|3.4e-62 R_Transcript_41587:557-1219(+)
MEAAGGGSEPSGGVEGGSTQPGPGGGSGSSELAGSSTSGAGPPSRYESQKRRDWNTFLQYLKNHKPPLSLSRCSGAHVIEFLKYLDQFGKTKVHISGCPYFGHPNPPNPCACPLKQAWGSLDALIGRLRAAYEENGGRPESNPFGARAVRIYLREVREAQAKARGIPYEKKKRKRPSATSTTTSTALPDQGAGGSAATASVAAAHDDGGAGVGPPPTTTT*

Click here to download the sequence:
Link to NCBI Protein BLAST