Transcript Information: R_Transcript_415893.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2704142363662
Replicate 20
Replicate 30.33935907549855
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.13445637496583
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.081686144039175
Replicate 30.081065572914435


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415893.p1 GENE.R_Transcript_415893~~R_Transcript_415893.p1 ORF type:internal len:270 (+),score=26.78,RVT_1|PF00078.23|7.7e-21 R_Transcript_415893:2-808(+)
TTAGACATGGCCAAGGCATACGATAGGGTGGAGTGGTCCTTCTTGGAGAGGGTATTGTGTAAGATGGGTTTTGCTTATACTTGGGTAGATCGAGTCATGATGTGTATCAAGTCGGTTTCTTTTAATGTCCTTATTAATGGGAACCCTACCGCAGAAATACTTCCTTCACGGGGTTTGCGGCAGGGGGACCCAATTTCACCCTATTTATTTTTATGTGTCACAGAAGCACTTTCGGGACTGATCAGAGGTGAGGAGATGAATGGGGCCTTGCAGGGGATAAGAGTGTGTGGAGGTGCACCCTCAATCACCCATTTATTCTTCGCCGATGATAGTCTAGTATTCTTCAAGGCTAACCGGTCACAAGCTGAAAAGATGCGTGACATACTGAGCATTTATGAGAGGGCCTCGGGTCAAAAAGTGAGCTTTGAAAAGTCGAAAATCTGGTTCAGCAAAGGTGTGCGACATGTTAATAGAGGAGAGGTGTGTATTGCCCTGGCTGTGGAGGAAGTTCCTCAACATGATCGATATTTAGGGTTGCCCATGATAGTTGGGAAGTCGAAGAAAGTCCTGTATGGCTCGCTAAAGGAGCGATTGTGGAAGAAGCTTCAAGGCTGGAAAGGTATGTTGTTGTCCAAAGCGGGTAGAGAAGTAATGATAAAGGCAGTGGCCCAATCTATCTCTACCTACGCGATGAGTGTATTTAAACTGCCAACATACTTTTGTAATGAAGTTCGGTCTTTGATCTCTAAATTCTTCTGGGGACAAAAGAAGGAGGAACGCAAAATTCATTGGGTGGCTTGGCGTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415893.p1 GENE.R_Transcript_415893~~R_Transcript_415893.p1 ORF type:internal len:270 (+),score=26.78,RVT_1|PF00078.23|7.7e-21 R_Transcript_415893:2-808(+)
LDMAKAYDRVEWSFLERVLCKMGFAYTWVDRVMMCIKSVSFNVLINGNPTAEILPSRGLRQGDPISPYLFLCVTEALSGLIRGEEMNGALQGIRVCGGAPSITHLFFADDSLVFFKANRSQAEKMRDILSIYERASGQKVSFEKSKIWFSKGVRHVNRGEVCIALAVEEVPQHDRYLGLPMIVGKSKKVLYGSLKERLWKKLQGWKGMLLSKAGREVMIKAVAQSISTYAMSVFKLPTYFCNEVRSLISKFFWGQKKEERKIHWVAWRK

Click here to download the sequence:
Link to NCBI Protein BLAST