Transcript Information: R_Transcript_415894.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98134198681284
Replicate 20.45153334228598
Replicate 30.67734976762816
Condition 2: 8 Hour
Replicate 10.19746665280036
Replicate 20.24043958969017
Replicate 30.34156256543739
Condition 3: 24 Hour
Replicate 10.80228896225848
Replicate 20.4150183124571
Replicate 30.35302749494996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_415894.p1 GENE.R_Transcript_415894~~R_Transcript_415894.p1 ORF type:complete len:372 (-),score=13.30,RVT_1|PF00078.23|1.3e-38 R_Transcript_415894:783-1898(-)
ATGAATTCTCATTTATGCCGTGCCTACTCGAGCGATGAGGTTCGGGTTGCACTTGGGCAAATGCACCCGCTCAAGGCCCCGGGACCCGACGGTATGTGTCCTCTCTTTTTTCAAAATTATTGGCATATTGTTGGTGAGAGTGTCTCTAATTTAGTTCTAGATTTCCTAAATGGGGGGCGTATGCCAAGGGGTCTTAATCACACTCACATTGTCCTAATCCCCGAAAAGAAGAATCCCATAAATATGACCGATTTTAGACCTATTAGCCTTTGCAATATCATTTTCAAATTAATTACCAAGGTAATAGCTAATAGACTCAAAGTTATTCTTCCCGAGATTATTGCTCCTAATCAAAGTGCATTCACCCCCGGGCGACTGATAACTGATAATATTTTGGTGTCTTTTGAGACCTGTCATTTCATGAAAAATCTTGAGTCTAGTGAGGGTTATGCGGCGTTGAAGTTGGACATGACCAAGGCTTATGATAGGGTGGAGTGGTCCTTTTTGCAAAAAGTATTGCTGAAATTGGGTTTTGACAATAGATGGGTGGATCGTGTGATGCTTTGTGTCACCTCGGTCTCTTTTGCCGTTCTTCTTAATGGGAAACCTACTGCGACCTTTCTCCCATCTAGAGGGTTGCGGCAAGGCGACCCGATTTCACCGTATTTATTTTTGTGTGTTACAGAAGCTTTTTCGGGACTCATTCGAAGGGCGGAGATGGATAGTCTTTTGCAGGGGGTTCGAGTGTGCGGAGGTGCACCTTCCATCACTCACTTATTTTTTGCTGACGACAGCCTCATTTTCTTCAAAGCAAACCAGCTACAAGCAGAGACAGTGCGGTCCATTTTGAGCACTTATGAAAGAGCCTCGGGTCAAAAAGTAAGCTTGGAGAAATCGAAGGTGTGGTTTAGTAAAGGGTTAGAAATACTGAAAGAAAGGAGGTGTGTGATGTGTTGGAGGTCGAGGAGGTCCATGGACATGATCAATACTTGGGGTTGCCTATGGTGGTCGGTAGGTCGAAAAAGCCGCTATACAATTCGTTACAAGAACGGTTGTGGAAAAAGCTCCAGGGCTGGAAAGGTATGTTGCTTTCTAAAGCGGGCAGAGAGGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_415894.p1 GENE.R_Transcript_415894~~R_Transcript_415894.p1 ORF type:complete len:372 (-),score=13.30,RVT_1|PF00078.23|1.3e-38 R_Transcript_415894:783-1898(-)
MNSHLCRAYSSDEVRVALGQMHPLKAPGPDGMCPLFFQNYWHIVGESVSNLVLDFLNGGRMPRGLNHTHIVLIPEKKNPINMTDFRPISLCNIIFKLITKVIANRLKVILPEIIAPNQSAFTPGRLITDNILVSFETCHFMKNLESSEGYAALKLDMTKAYDRVEWSFLQKVLLKLGFDNRWVDRVMLCVTSVSFAVLLNGKPTATFLPSRGLRQGDPISPYLFLCVTEAFSGLIRRAEMDSLLQGVRVCGGAPSITHLFFADDSLIFFKANQLQAETVRSILSTYERASGQKVSLEKSKVWFSKGLEILKERRCVMCWRSRRSMDMINTWGCLWWSVGRKSRYTIRYKNGCGKSSRAGKVCCFLKRAERS*

Click here to download the sequence:
Link to NCBI Protein BLAST