Transcript Information: R_Transcript_41596.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value8.6E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.770610741577
Replicate 212.308176106106
Replicate 320.424234014303
Condition 2: 8 Hour
Replicate 114.715642973221
Replicate 215.200993566914
Replicate 319.850529841014
Condition 3: 24 Hour
Replicate 119.791213127331
Replicate 216.296989328013
Replicate 316.820108035251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41596.p1 GENE.R_Transcript_41596~~R_Transcript_41596.p1 ORF type:internal len:203 (+),score=12.87,PIG-F|PF06699.7|4.6e-31 R_Transcript_41596:2-607(+)
TTATATACTGGAACTGCGGCTAGAAGATCAGGAACTATTCATTTGCACATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCTTTCTTAGTGGCCAATCATATCTACCATATCAATCTCATATCGGATCCTGAAACTATGCTGCTTATATCTTGGGTCATAGAGTGCCCAATTGTAGCCCTAATTTATAGTCGTTTTAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATTGCACTGGGAGCTATTACATTGGGTGCACCCGTTGGCGCAAAATATCTGTGGAGGACACTATACTGGTCCCTTCTGATGTCATTGTTTACATTTGCACCTGCTGCATCCGTTTTTGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGGGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41596.p1 GENE.R_Transcript_41596~~R_Transcript_41596.p1 ORF type:internal len:203 (+),score=12.87,PIG-F|PF06699.7|4.6e-31 R_Transcript_41596:2-607(+)
LYTGTAARRSGTIHLHISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHINLISDPETMLLISWVIECPIVALIYSRFRKNPAKCSYLKAVGRGLLGLVAGAMVIALGAITLGAPVGAKYLWRTLYWSLLMSLFTFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQ

Click here to download the sequence:
Link to NCBI Protein BLAST