Transcript Information: R_Transcript_41600.p2


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value1.5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6899100354322
Replicate 29.0615612322971
Replicate 36.2692123947365
Condition 2: 8 Hour
Replicate 16.7013946171408
Replicate 25.4136871826028
Replicate 38.0249225900658
Condition 3: 24 Hour
Replicate 15.3165448316788
Replicate 24.8753730179171
Replicate 310.598257006287


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41600.p2 GENE.R_Transcript_41600~~R_Transcript_41600.p2 ORF type:3prime_partial len:95 (+),score=8.55,PIG-F|PF06699.7|5.6e-15 R_Transcript_41600:768-1049(+)
ATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTTGCACCTGCTGCATCCGTTTTTGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGGGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41600.p2 GENE.R_Transcript_41600~~R_Transcript_41600.p2 ORF type:3prime_partial len:95 (+),score=8.55,PIG-F|PF06699.7|5.6e-15 R_Transcript_41600:768-1049(+)
MLVFEGGRTGAIGACCRGDGDRTRSYYLGCTRWHKFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQ

Click here to download the sequence:
Link to NCBI Protein BLAST