Transcript Information: R_Transcript_416077.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeOrtholog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value6.9E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.46988179684415
Condition 2: 8 Hour
Replicate 10
Replicate 20.8026983225041
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.11310389174655
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_416077.p1 GENE.R_Transcript_416077~~R_Transcript_416077.p1 ORF type:5prime_partial len:195 (+),score=41.92,Chloroa_b-bind|PF00504.17|1.6e-40 R_Transcript_416077:3-587(+)
GGACTTTCGGACCCTGAAGGAACAGGAGGGTTCATTGAGCCGAAATGGCTAGCATATGGTGAGATAATCAATGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCAATAGCACCTGAAATTCTAGGCAAGGCTGGTCTGATCCCTCAGGAGACAGCACTCCCATGGTTCAGAACCGGTGTGTTCCCACCTGCAGGAACCTACAACTACTGGGCAGACTCCTACACACTGTTCGTGTTTGAGATGGCACTGATGGGATTTGCAGAGCACAGAAGATTCCAAGACTGGGCCAAACCAGGCTCTATGGGCAAACAATACTTCCTAGGACTAGAGAAGGGGCTTGGAGGTTCTGGTGAGCCAGCTTATCCAGGAGGACCTTTCTTCAACCCACTTGGCTTTGGTAAGGATGAGAAGTCCTTGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTGTTCAAGCTCTTGTCACAGGTGTTGGCCCATACCAAAACCTCCTAGATCATTTGGCTGACCCCGTGCACAACAACATCTTGACCAGTCTCAAGTTCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_416077.p1 GENE.R_Transcript_416077~~R_Transcript_416077.p1 ORF type:5prime_partial len:195 (+),score=41.92,Chloroa_b-bind|PF00504.17|1.6e-40 R_Transcript_416077:3-587(+)
GLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSLKFH*

Click here to download the sequence:
Link to NCBI Protein BLAST