Transcript Information: R_Transcript_4164.p1


Annotated TAIR IDAT4G12980.1
Annotated Gene NameAuxin-responsive family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7589670-7591074 | Reverse length=394
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.107764284889
Replicate 247.576723283739
Replicate 340.330479491098
Condition 2: 8 Hour
Replicate 110.028785111372
Replicate 29.1584462860175
Replicate 39.9447653930843
Condition 3: 24 Hour
Replicate 116.11931145775
Replicate 223.34572616609
Replicate 313.039483643258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4164.p1 GENE.R_Transcript_4164~~R_Transcript_4164.p1 ORF type:5prime_partial len:188 (+),score=31.71,DUF568|PF04526.9|3.9e-26 R_Transcript_4164:1-564(+)
ACCTCCACATCCTCCCTCTCGGTGGCCTTCACCGCCTCGCCCCCCACCTCCGACGGCTGGGTTGCCTTCGCCTTGAACCCAACGGGCTCCGGCATGGTGGGGGCCCAAGCTCTCATTGCCTTCAAGCCCACTCCTTCCGGCCCAGTCTCGGTTTCCACCTATAACATCCAGTCCTACCGTGCCATCATCAAGGGTCCAATCTCCTACGACGTCACCCACCTCGGGGCCCAAGAATCCGACGGTGAGACCACCATCTTCTCCATGTGGGCCCTCCCTGAAGGATCATCATCAGCGGTCAACATTGTCTGGCAAGTGGGCCCCGTTGTCAATGGTAAGATTGGTAAGCATGCTTTTGAGGAAGCTAACTTGAACTCAGCAATGAAGCTTGATCTTGTTAGTGGGCCTGAGATGGGCTCGCCTGCCATGTCGCCGGGCCCGGTTTCCGGTGATGATGTGGGTGAAGCGTCAGCACCAACACCAGCTATGAGTGGGGCAGCAGCTGCAGCCAAGACTTCTTCAATCATGCTGATCGTTTTGGGGGTTTTTGTTGTTTCCTTGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4164.p1 GENE.R_Transcript_4164~~R_Transcript_4164.p1 ORF type:5prime_partial len:188 (+),score=31.71,DUF568|PF04526.9|3.9e-26 R_Transcript_4164:1-564(+)
TSTSSLSVAFTASPPTSDGWVAFALNPTGSGMVGAQALIAFKPTPSGPVSVSTYNIQSYRAIIKGPISYDVTHLGAQESDGETTIFSMWALPEGSSSAVNIVWQVGPVVNGKIGKHAFEEANLNSAMKLDLVSGPEMGSPAMSPGPVSGDDVGEASAPTPAMSGAAAAAKTSSIMLIVLGVFVVSLF*

Click here to download the sequence:
Link to NCBI Protein BLAST