Transcript Information: R_Transcript_416497.p1


Annotated TAIR IDAT2G05630.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8D
Annotation TypeOrtholog
Chromosome Positionchr2:2083211-2084775 | Reverse length=164
E-Value1.6E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17058842013756
Replicate 20
Replicate 30.42816331955425
Condition 2: 8 Hour
Replicate 10.22883985932005
Replicate 20.62694061236969
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.41224782973042
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_416497.p1 GENE.R_Transcript_416497~~R_Transcript_416497.p1 ORF type:5prime_partial len:107 (+),score=8.36,Atg8|PF02991.12|1.1e-37,APG12|PF04110.9|3.4e-07 R_Transcript_416497:2-322(+)
CGAAAAGAAGTTGCAGAAAGAATCCTCAAGAATTACCAAGACAGATTACCAGTTATTGTAGAAAAAGCTCCCAAATCAGACGCACCCGATATCGCTAAACAAAAGTTTCTTGTTCCAAAGGATATCACTGCAGGAAAATTTGTGTGCGAAGTAAGAAAACATATGAAATTAGAACCAGAAAAAGGAATATTCTTATTTGTAAAGAATGGTGTACTTCCTCCTGCAAACGAACAAATGTCGTCTATTTATGACAAATATAAGGATGAAGATGGCTTCCTCTACATTAGTTATAATGGCGAGAACACCTTTGGCTCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_416497.p1 GENE.R_Transcript_416497~~R_Transcript_416497.p1 ORF type:5prime_partial len:107 (+),score=8.36,Atg8|PF02991.12|1.1e-37,APG12|PF04110.9|3.4e-07 R_Transcript_416497:2-322(+)
RKEVAERILKNYQDRLPVIVEKAPKSDAPDIAKQKFLVPKDITAGKFVCEVRKHMKLEPEKGIFLFVKNGVLPPANEQMSSIYDKYKDEDGFLYISYNGENTFGSF*

Click here to download the sequence:
Link to NCBI Protein BLAST