Transcript Information: R_Transcript_416611.p1


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.40377500800573
Replicate 30.1468380615138
Condition 2: 8 Hour
Replicate 10
Replicate 20.28667797232289
Replicate 30.11635647833581
Condition 3: 24 Hour
Replicate 10.14716543094682
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_416611.p1 GENE.R_Transcript_416611~~R_Transcript_416611.p1 ORF type:complete len:156 (-),score=21.17,zf-RVT|PF13966.2|4.5e-18,zf-RVT|PF13966.2|6.1e+03 R_Transcript_416611:321-788(-)
ATGCAAATATGGAAGGCTAGACGAGGAAAAATTGCAACAGAGGCTTATCAGTGGTTCAGAACTACTACCAGGAAGGTGAGGTGGGAGAAGACTATATGGGATTCAGCAAATACCCCCAAACATTTGGTTATTGTTACCTTAGCAATACAGAATGCTCTACCTACAGTTGATAATATGATTAAGTGTGGTATGCAGCTAATAAATAGATGTATCTTATGCAAGCAACAGCAAGAGACTGTACAACATCTGTTCTTTGACTGCACCCTGTCCAAACAAATATGGCACAATATATTAACTTGGATGAGAGAAACTCGAAGAGGCAGGAACCTGAAGAAAGAGATTAAATGGTATAGCAGTTGGGTGAATAGGACACAGTGGAGGAAAAAATGGAGAAGATGTGCATTGGTTGCTACCATCTATGAACTCTGGAAGGAAAGAAATAGAAGACTATTTGAAGAGCAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_416611.p1 GENE.R_Transcript_416611~~R_Transcript_416611.p1 ORF type:complete len:156 (-),score=21.17,zf-RVT|PF13966.2|4.5e-18,zf-RVT|PF13966.2|6.1e+03 R_Transcript_416611:321-788(-)
MQIWKARRGKIATEAYQWFRTTTRKVRWEKTIWDSANTPKHLVIVTLAIQNALPTVDNMIKCGMQLINRCILCKQQQETVQHLFFDCTLSKQIWHNILTWMRETRRGRNLKKEIKWYSSWVNRTQWRKKWRRCALVATIYELWKERNRRLFEEQD*

Click here to download the sequence:
Link to NCBI Protein BLAST