Transcript Information: R_Transcript_416613.p1


Annotated TAIR IDAT1G07090.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH6
Annotation TypeOrtholog
Chromosome Positionchr1:2174202-2174792 | Reverse length=196
E-Value8.9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3569347472333
Replicate 21.1580693275176
Replicate 31.7028989579873
Condition 2: 8 Hour
Replicate 10.70462920711497
Replicate 21.0188411390468
Replicate 31.044697014123
Condition 3: 24 Hour
Replicate 10.71571101669102
Replicate 20.95202556362204
Replicate 30.89230450761932


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_416613.p1 GENE.R_Transcript_416613~~R_Transcript_416613.p1 ORF type:5prime_partial len:417 (-),score=69.33 R_Transcript_416613:1945-3195(-)
TCTGGGAGAGAAATAGAAGAGTTGCCTACTTCCACTACTAAGCTCTATGGGCTGCAAGTCCTTAGACTAATTGGCTGTGATATACTTGAACTACCTGCCAATACCAAAAACTTAACCAACCTTCTACATCTTGAGGTGGACATAAAACGGTTGTCTAGTATGCCGCCTAACATTGGAAGGCTCACTAACCTCCGAACACTGCCTGCATTTATTGTGGGCGATGAGGAAGGGTATCGAGTCACAGAGTTGAAGAACATGAAGCAACTTCAAGGGTCAATTTGCCTCACAAATCTAGAGAATGTCAACAGTGCCGATGAAGCAAAGGAAGCCATGTTGAGTAATAAACCATTCATTAAAAGGTTAGAATTCGAATGGATCAGCTATATGATTGATCAGTCACAAACTGAAGCAGTCCTTGCTGAACTCGAACCTCACAAGGATTTGGAAGAGCTACAAATAATCGAGTACGGTGGTCTTGAATTCCCGAGTTGGCTCAGTAGACCAGAGTGCAGACTCACAAGCATTCACCTAATAAGATGCTACAGTTGCAAGAGCTTGCCACCACTTGGTCAGCTTCCACATCTTAGAACTCTTCACATACAGGAAATGCGAGGCATACAGCATGTAGACCACCGGTTTTCAGGTGTAGCAGGATTCCATAAATTAGAATCGTTAGTATTTGAAGGCATGCAAGAGCTCAAAGAGTGGGAGGATGGATTGGAAATGCCTCATCTTCACAACCTCAAGATTGTGGATTGTCCGAAGTTGTGTGCCTTGCCTTCACTGAGCGGGCTTACTGCCTTAGAAAATTTGGAAATCAGAGAATGTGCTGCTTTGTGTTCATTGCCGCGGGGACATATCCCATCATCACTTGAACAATTGATTATTGAACGAAGTGATCTGCTCAAACAGCAATGTCTTGATACCTCTGATAATATCGAAGCTGATTATGGTATTGGTGCTAGCACTGATACTGGTACTGGATCTGGTCCTCAGTTATCAGGAGGATCTGACAGGCAGAATCCAAGCAGCAGGTATGACTCACAGAAATGGAGGGATCGGAACACCTTCTGCCAGTTCCTGAAGAACAAGGAGCCCCCAGTGGCCTTGTCGAGCTTGTCCAGGGCGGCAGTGCCCATGTCAGAGAATTCATCAAGTGCCTTGATCAGTTTGGTAAGACCAAAGTTCACATCATTAGATGTGTATTCTTTGGCATCTACCAACCCCCTGCACCCTGTTCCTGCCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_416613.p1 GENE.R_Transcript_416613~~R_Transcript_416613.p1 ORF type:5prime_partial len:417 (-),score=69.33 R_Transcript_416613:1945-3195(-)
SGREIEELPTSTTKLYGLQVLRLIGCDILELPANTKNLTNLLHLEVDIKRLSSMPPNIGRLTNLRTLPAFIVGDEEGYRVTELKNMKQLQGSICLTNLENVNSADEAKEAMLSNKPFIKRLEFEWISYMIDQSQTEAVLAELEPHKDLEELQIIEYGGLEFPSWLSRPECRLTSIHLIRCYSCKSLPPLGQLPHLRTLHIQEMRGIQHVDHRFSGVAGFHKLESLVFEGMQELKEWEDGLEMPHLHNLKIVDCPKLCALPSLSGLTALENLEIRECAALCSLPRGHIPSSLEQLIIERSDLLKQQCLDTSDNIEADYGIGASTDTGTGSGPQLSGGSDRQNPSSRYDSQKWRDRNTFCQFLKNKEPPVALSSLSRAAVPMSENSSSALISLVRPKFTSLDVYSLASTNPLHPVPAL*

Click here to download the sequence:
Link to NCBI Protein BLAST