Transcript Information: R_Transcript_416695.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12008526943894
Replicate 20
Replicate 30.30140444205464
Condition 2: 8 Hour
Replicate 10
Replicate 20.14711106474464
Replicate 30
Condition 3: 24 Hour
Replicate 10.15103820544542
Replicate 20.14510038743801
Replicate 30.14399805715064


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_416695.p1 GENE.R_Transcript_416695~~R_Transcript_416695.p1 ORF type:3prime_partial len:152 (+),score=30.31,RVT_1|PF00078.23|4.1e-17 R_Transcript_416695:75-527(+)
ATGATGATGAAAACTTTTGGTACTTTTATGGGTCTCCATTTGCAAAAGAAAGCTATTGGTACTTTTAAGGAGCAAAATGCTTTTGTTAAGGATAGGAGTCTACATGAGAGTATTGCCATGGCTTCTGAAATATTCAAGCACTATGAGAGGAGGAATGTCTCTCCTAGAAGTGTCCTGAAGGTTTACTTTAAGAAAGCTTATGACACAATCAGTTGGAATTTCCTAGAGCAGGTGATGAGGGGCTTTCTGTTTCCTTCGCCTTTTGTTGAGTGGGTGATGCAATGCATTTCTGGTGCCATGTTCTCAATAACCCTGAATGGAGTTCCTTATGGATATTTCAAGAGTGGTAGGGGTCTTAGGCAAGAGGACCCCATATCCCCCTATTTGTTTGTGCTTGGTATGGAGGTCCTTACAAGAATGGTGAAGAGGTTGAATCAAAAGTTGATTCGGGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_416695.p1 GENE.R_Transcript_416695~~R_Transcript_416695.p1 ORF type:3prime_partial len:152 (+),score=30.31,RVT_1|PF00078.23|4.1e-17 R_Transcript_416695:75-527(+)
MMMKTFGTFMGLHLQKKAIGTFKEQNAFVKDRSLHESIAMASEIFKHYERRNVSPRSVLKVYFKKAYDTISWNFLEQVMRGFLFPSPFVEWVMQCISGAMFSITLNGVPYGYFKSGRGLRQEDPISPYLFVLGMEVLTRMVKRLNQKLIRA

Click here to download the sequence:
Link to NCBI Protein BLAST