Transcript Information: R_Transcript_41701.p1


Annotated TAIR IDAT4G17960.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9971154-9972227 | Forward length=154
E-Value2.8E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.287257467287
Replicate 213.782186939929
Replicate 313.509101659269
Condition 2: 8 Hour
Replicate 116.32390996483
Replicate 219.838115684744
Replicate 318.710121716399
Condition 3: 24 Hour
Replicate 118.130781092648
Replicate 215.269025385784
Replicate 314.928537042858


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41701.p1 GENE.R_Transcript_41701~~R_Transcript_41701.p1 ORF type:5prime_partial len:195 (-),score=27.97 R_Transcript_41701:415-999(-)
ACCCCCACCCCATTTACTTCTTCTTTCACTTTGCTTTCAACCTTTCGTCGCTGTTCGTTAGACCGGCGACGACAATTAGTACTAATTCAAATGAAGTTCTTCAAAAAAGTTTTTGGATTTCTAGGGTTTGGCAAAGATGACGGGCATGATACTTCAACAAAGGATGATCATGATCATGATAATGAGCACCATCATCATCATAATTCCGATGATGTACACCGTAATCGAATGTATGTAGACCCGATTCCTGGTCCACGTCAAGGGTTTAAGGTTCCTGTTCAAGTCGCCGTTGAACGCCCTGCTCCGGGCCCCGTTTTGCTTCCTTGTCATGGCGATGGCGGTGTTCAGGGTCTCAGCTGGTATGCGAAGCTTCTGAAAATAGATGAGGATGGGGATGTAGCTGATGAATTTGTCCACCAAGTTTTGCCAGACATGTCATCCGTTGTGCAAGATCAACCAAAGCCATTGCCAAGATTCCAAGTGAAACATAATGTAAGACATGCAAAAGTACAAAATCAGATCATGACACTTGATGGGAAGCTTATACAGTGTGTGGAATGGCAAGGCAGACTGCAGTGGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41701.p1 GENE.R_Transcript_41701~~R_Transcript_41701.p1 ORF type:5prime_partial len:195 (-),score=27.97 R_Transcript_41701:415-999(-)
TPTPFTSSFTLLSTFRRCSLDRRRQLVLIQMKFFKKVFGFLGFGKDDGHDTSTKDDHDHDNEHHHHHNSDDVHRNRMYVDPIPGPRQGFKVPVQVAVERPAPGPVLLPCHGDGGVQGLSWYAKLLKIDEDGDVADEFVHQVLPDMSSVVQDQPKPLPRFQVKHNVRHAKVQNQIMTLDGKLIQCVEWQGRLQWV*

Click here to download the sequence:
Link to NCBI Protein BLAST