Transcript Information: R_Transcript_41709.p1


Annotated TAIR IDAT5G38840.1
Annotated Gene NameSMAD/FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15551329-15554846 | Forward length=735
E-Value3.2E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.916166522393
Replicate 29.7664156986194
Replicate 312.219099002215
Condition 2: 8 Hour
Replicate 18.9862776051056
Replicate 29.7968017170486
Replicate 312.419523056054
Condition 3: 24 Hour
Replicate 116.818308282031
Replicate 211.827642392244
Replicate 315.038067373786


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41709.p1 GENE.R_Transcript_41709~~R_Transcript_41709.p1 ORF type:5prime_partial len:703 (+),score=206.44,FHA|PF00498.22|6.3e-21 R_Transcript_41709:1-2109(+)
TCTGCAACTGTAACTGTAACTGAACCCGATTCTTCCATGCCTTCTTCAGAACCACAAGAAGAAGAAGAAGAAGAAGTAGAAGAAAAGCAAAAGAAGAAGAATTCGAATGCGAATGTGGCGGTTCCTTGCACAATTCCGGAGTGGAGTAGAGCTCCTTCTCATCCTTTTCAGCTCGAAGTTCTCAAGGATGGCTCCATCATCGACCACCTTGACGTAACAAAGAAAGGGGCTTACATGTTTGGTCGTATTGATCTCTGTGATTTCGTTCTCGAGCACCCTACTATCTCCCGCTTTCATGCTGTTCTCCAGTTCAAGGGAAATGGAAAAGCCTATCTTTATGATCTTGGAAGCACGCATGGAACATTTATTAACAAAAATCAGGTCAAAAAGAAAGTGTATGTGGAGCTGCATGTGGGTGATGTAATTCGATTTGGCCTTTCGTCTCGATTGTATATATTCCAAGGCCCAACTGAATTGATGCCACCCGAAGCTGATCTGACGAGTATTACGTATGCTAAGGATCGGGAAGCTTCCCTTCGCCGGGCAAGAGAGGATGCAGCTCTTGCTGGTGGTGTTTCGTGGGGTATGAGGGAGGATGCAATTGAAGAAGAAGAGGATGATACTGATGAGATAACATGGCAAAACTACAAAGGAGAACTCACAGAAAAACAACAGAAAACCCGGGAGAAAGTTCTCAAAAGGATGGAGAAGATTGCACATATGAAAAAAGAGATATCTGCAATTCGTGCTAAAGACATATCCCAAGGAGGTTTGACCCAAGGACAACAAACACAAATTGCCCGAAATGAGCTTCGGATATCTCAGATAATGGAAGAGTTAGAGAGCTTGGAGGAGACATTAAATGATAGTATCCGAGAAAGTTTAGGTGCTCGTTCTGGGAAATCATCTCGTGGTAGGCAAAAAGGGGCAGCTGAGGACGAGGATGAGTTTTTAAGTGATGATGATGAGTTTTATGACCGAACAAAGACAGTTCGTAAACCTGTTGATACACAGTCAATTGAAACAGCGGATTCTCTTCTGGATAAGAAAGAGGCACTGGTGAATGAAATGGAAGAAAAGCGAAGATTGATTCTGGAAGAGAAGAACAAAGCTCCTGAACCTGATAAACAAGATGCTGGAGATGCACTGGATGCGTTTATGTCTGGTCTCTCATCTCAGCTTGTTCATGATAAGACTCTGCAACTTGAGAGGGATCTATCCTCCCTTCAGGCAGAGTTGGATAGGATTGTGTACTTGCTCAAGTTCGCTGACCCTACGGGAGATGCTGCTAAGAAAAGGGAGACCACTTCCCAGAAGCCCAAATCTAATGAATCAGCATCTTCTAGTGTTCTTTTCAAGAGACCTGAGAAGTCTCAAATTGAACTCAAAAAGGTCATTCAGGATAAGAAGCCAGTTAGCACTTCAAAGAAGGTCAATCATGATGGGAAGCCAATTAGCCGCTCCATCACAAAAGAAACAGAGCCAAATGTAACTGAAGAAGCTATTGAAAAACCAAAACCTGATGTAGATGTAGCTGATCCGACCGGAAGAAAACCTGCTGTTTATCAGGTTGCAAAGCCTCAGTGGCTTGGGGCAGTGGCAGACAAGGAAAGGGAAGAGACCCAGCAAGAGAAACATGCAGACACCCATGATGATGAGGACGGCTTTGTTGATTACCAAGATAGGAACAAGATTTTGAGTTCCGATAATTCTCAGCCAGAATTGCTGGAGTCTGATCTTGAAAATGCTGCCCCAGGTCTTATATTGAGGAAAAAGAAACAGGTCAAAGGAACAGAAACAAGGGAGGAGGAACCATCGAATCCATCAATACCGGGACCTGATGGAGCTGACATGATGGCCGAAAATGCCATTGCTTTATTGTTGAAACATAAACGAGGACTCCATGCTTCTGATGAAGAAGTGACTCTTGAAAGCCATGACAGAAGAGGTCAAAAGTCATCTGGACAGGATAACAAAAGACCTAGAAGAGTTCTTGGCCCCGAAAAGCCTGCTTTCCTGCAGACCAATTCGGACTACGAAACATGGGTACCCCCAGAAGGACAATCTGGTGATGGGCGGACATCATTGAATGATCGTCTTGGTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41709.p1 GENE.R_Transcript_41709~~R_Transcript_41709.p1 ORF type:5prime_partial len:703 (+),score=206.44,FHA|PF00498.22|6.3e-21 R_Transcript_41709:1-2109(+)
SATVTVTEPDSSMPSSEPQEEEEEEVEEKQKKKNSNANVAVPCTIPEWSRAPSHPFQLEVLKDGSIIDHLDVTKKGAYMFGRIDLCDFVLEHPTISRFHAVLQFKGNGKAYLYDLGSTHGTFINKNQVKKKVYVELHVGDVIRFGLSSRLYIFQGPTELMPPEADLTSITYAKDREASLRRAREDAALAGGVSWGMREDAIEEEEDDTDEITWQNYKGELTEKQQKTREKVLKRMEKIAHMKKEISAIRAKDISQGGLTQGQQTQIARNELRISQIMEELESLEETLNDSIRESLGARSGKSSRGRQKGAAEDEDEFLSDDDEFYDRTKTVRKPVDTQSIETADSLLDKKEALVNEMEEKRRLILEEKNKAPEPDKQDAGDALDAFMSGLSSQLVHDKTLQLERDLSSLQAELDRIVYLLKFADPTGDAAKKRETTSQKPKSNESASSSVLFKRPEKSQIELKKVIQDKKPVSTSKKVNHDGKPISRSITKETEPNVTEEAIEKPKPDVDVADPTGRKPAVYQVAKPQWLGAVADKEREETQQEKHADTHDDEDGFVDYQDRNKILSSDNSQPELLESDLENAAPGLILRKKKQVKGTETREEEPSNPSIPGPDGADMMAENAIALLLKHKRGLHASDEEVTLESHDRRGQKSSGQDNKRPRRVLGPEKPAFLQTNSDYETWVPPEGQSGDGRTSLNDRLGY*

Click here to download the sequence:
Link to NCBI Protein BLAST