Transcript Information: R_Transcript_417285.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13323329164028
Replicate 20
Replicate 30.33440492841099
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.39748052453402
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15976426778757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_417285.p1 GENE.R_Transcript_417285~~R_Transcript_417285.p1 ORF type:3prime_partial len:137 (+),score=12.17 R_Transcript_417285:159-566(+)
ATGCATGGTATCTCTGTAACGGCACCATATGATTCTTCCACATCTAATCACTTTACACCTCATAAAACCACACCAAACATATCATCCTCATCAAATTCTAATCCCATCGCTTCTCTGCCGCACATTATTGATCATTTTGCACCACCACCACAAATCAATCCACCCTCTTCCATTAGTATTACACAATCTAAGCTTCAGATGCACAAATCAAACTCAAAGCAAGCGAACTACACTACTACTCAACCCCAACCCATTGAACCCATTAATGTAGTTCAGGCTCTACAAGACCCACTTTGGCGTCAAGCTATGTTGGATGAGCTTCGTTCTCTCTACACCCTTGGCATGTGGGATCCGGTGCCCCTCAATTCCGGTCATATTCTCACCAAGTGCAAGTGGGTGTTTTGTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_417285.p1 GENE.R_Transcript_417285~~R_Transcript_417285.p1 ORF type:3prime_partial len:137 (+),score=12.17 R_Transcript_417285:159-566(+)
MHGISVTAPYDSSTSNHFTPHKTTPNISSSSNSNPIASLPHIIDHFAPPPQINPPSSISITQSKLQMHKSNSKQANYTTTQPQPIEPINVVQALQDPLWRQAMLDELRSLYTLGMWDPVPLNSGHILTKCKWVFCI

Click here to download the sequence:
Link to NCBI Protein BLAST