Transcript Information: R_Transcript_4174.p1


Annotated TAIR IDAT1G58983.1
Annotated Gene NameRibosomal protein S5 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21806279-21807475 | Reverse length=284
E-Value6.5E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1697.80324711075
Replicate 2867.38287995288
Replicate 3759.66221619893
Condition 2: 8 Hour
Replicate 1644.12816157141
Replicate 2692.95916481307
Replicate 3606.87502242549
Condition 3: 24 Hour
Replicate 1723.40519101174
Replicate 2783.63685160194
Replicate 3679.74723688339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4174.p1 GENE.R_Transcript_4174~~R_Transcript_4174.p1 ORF type:5prime_partial len:196 (+),score=36.56,Ribosomal_S5|PF00333.16|1.7e-32,Ribosomal_S5_C|PF03719.11|1e-25 R_Transcript_4174:2-589(+)
CTCATCGGCCCAGCACTCAAGGATGAGGTCATGAAAATCATGCCGGTTCAGAAACAGACCCGGGCCGGACAGAGAACCCGGTTCAAGGCCTTTGTCGTCGTCGGTGACGGGAACGGCCACGTCGGATTGGGTGTCAAGTGCTCCAAGGAGGTTGCAACTGCCATACGTGGCGCAATCATATTGGCCAAGCTGTCTGTGATTCCGGTCAGGAGAGGATACTGGGGTAACAAGATTGGGAAGCCACACACTGTTCCTTGTAAGGTGACTGGGAAATGTGGGTCCGTTACTGTGAGGATGGTCCCGGCCCCACGTGGTGCTGGTATTGTTGCTGCTAGGGTTCCTAAGAAGGTGCTTCAATTTGCTGGTATTGAGGATGTTTTCACTTCTTCTCGTGGGTCCACCAAGACCCTCGGTAACTTTGTCAAGGCAACATTTGAGTGTTTGTTGAAGACCTACGGTTTCTTGACACCAGACTTCTGGAAGGAGACCCGCTTCACCAAGTCTCCATTCCAAGAGCACACCGACTTCCTGTCTAAGCCCATTGGCAAGTTGACCTTGGTCGAAGATGTTGAGAGGGTTGAGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4174.p1 GENE.R_Transcript_4174~~R_Transcript_4174.p1 ORF type:5prime_partial len:196 (+),score=36.56,Ribosomal_S5|PF00333.16|1.7e-32,Ribosomal_S5_C|PF03719.11|1e-25 R_Transcript_4174:2-589(+)
LIGPALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWKETRFTKSPFQEHTDFLSKPIGKLTLVEDVERVEA*

Click here to download the sequence:
Link to NCBI Protein BLAST