Transcript Information: R_Transcript_41768.p1


Annotated TAIR IDAT5G65950.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26380290-26384960 | Forward length=1190
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3401790364162
Replicate 23.0019941722209
Replicate 34.3154829449438
Condition 2: 8 Hour
Replicate 14.5100121307373
Replicate 25.1341637869165
Replicate 38.1521951819063
Condition 3: 24 Hour
Replicate 17.3179217319595
Replicate 25.1196395742635
Replicate 37.3633993900411


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41768.p1 GENE.R_Transcript_41768~~R_Transcript_41768.p1 ORF type:complete len:1189 (+),score=254.99,Foie-gras_1|PF11817.4|2.8e-59 R_Transcript_41768:182-3748(+)
ATGGAGGAATACCCCGAAGAACTCCGAACACCACCGGTCCCCCTAATCTCCCTCGTAGGATATCCAGAACTCCACGCATCGATCTCAGCTCACCTTCATTCTGAAAAGCCCCCAATCAACACTCTCGCATTGCCCGATTTCTCCAAGATCTCCGTCCTTTCCAAAAACCCTAAATCCACCGATCATCAATCACAACCACAACCGCCTTTGGGGATTCTGAAAAAGGATTGGTTGATTAAACACCGTAAGAAGATCCCTGCCGTTGTCGGTGCTCTCTTCCCTTCTGATCATGTTTCCGGTGATCCTGCTCAGTGGCTCCAGCTTTGCACTCTCCTTGATAATCTCAAAGCAGTTCTTCGTACAAGGAATATCAAGTTGATAGTTGTTGTTGTGCAATCATCTTCTGAAGATGATATGAATGAAGATCGCATGATCGCATTACGCAAACGTGCTGAAGTAGACTCCAAATACATTATTAATTTCTCCATCAGAGATTCATCAGAAGTTAAACAGTCTCTTAACAGGTTAGGAGCTGTGTTTGCGGAGTTGGTAAGTATATATTACCGGGATGAAGGAAGACGAATCAAGTCACGGGTTGAGAAGAGAAATTTTGCTTATCCTGAATTGGGTATCCGTTACTGCTTTAAGGTTGCTGTTTTTGCTGAGTTTCGTAGAGATTGGGTTGAAGCATTAAAATTCTATGAAGATGCATACCATGCATTGAGAGAGATGGTTGGGACATCTACCAGGTTGCCAGCGATACAACGTTTAATAGAGATAAAAACACTTGCAGAACAATTGCATTTTAAGATATCTACTTTGTTACTACATGGTGGAAAAATCATAGAAGCAGTTTTGTGGTTCAACCAGCACTGTACTTCTTACAAGAAGCTTGTAGGAGCTGCTGAAGTTACTTTTCTTCACTGGGAGTGGATCAGCAGACAATTTTTGGTCTTTGCTGAGTTACTAGAGACAAGTTCGAAAAACATTCCTGGCTTTTCTTCTATAGTATTGACTGTCGGGGATAAAACTGTGACAGATTTGGAACTTCAACCAGCCTACTACTATCAGCTGTCATCTCAGTACTTGAAAGAGAAGAGATCTTGCCTGGAACTTGCTCTCTCTATGTGGGAGGTCTTCAGTGAGAGTGATGCTGCTGGCGAGTCAGTTATACCATCAGGTTATGTTGGGCAGTTTGCAAGATTACTGGAACAAAGTCCCGATGAAGTCACTTTGCAACCTCTTACAGATGAAGATTTCGTTCGATATGCTATTGCAGAAGGGAAAAGATTCCAGGATTCCTTTGAAATCATTGCTCTTCTGAAGAAATCGTATGAAATATATACTGGCATGAAGGCTTTGAGAACGGCATCATATTGTGCTTCCCAAATGGCCAAAGAATACTTTTCTATCGGTGAAACAAAAAATGCAAAACAATACTTTGATTATGCTGTCAGTTTGTATAGGCATGAGGGTTGGGTCACCTTACTGTGGGAGATCTTGGGTTATTTACGTGAGTGTTCAAAGCAAGATGGTTCATTGAAAGAGTTCGTTGAGTATTCACTTGAGATGGCTGCACTGCCAGTATCATCAGAAGATTCTTTTGGCTATAAAGATTGTGGCCCCGCTGGTCCTCCAAGTTTCCAACAAAGAGAGGTAATTCACAAAGAAGTTGTGGGCCTTGTTACTGGAGAATTGGCTCTTTCATCGAATGATGTTGATAAAAACCTCAGGGTGACCATAGATTCTCCTCTTCATCTTGAAATTGATATTGTCAGTCCCCTTAGGGTTGTACTTCTTGCTTCAGTTGTATTTCATGAACAAGCAGTCAAGCCAGGCATGCCAACACAAATTACATTATCTCTCCTGTCACAACTGCCTCTCCATTTTGAGATTGATGCCCTGGAAGTTCAATTCAATCAGTCAGAATGTAATTTTGCCATCCAGAACTCTCAGAAAGCCTCAGCTCCTTTGAATTCTACAAGTCAACCAGGTTACCGAGTAGAAACTGCTCCAGCTTTGGCACTTCTTACGAATAAATGGCTAAGATTGACTTATGATGTTAAATCTGATCGGAGTGGAAAGCTTGAATGTGTCTCTGTAATTGCGAGAATTGGATCCCACTTCACTATATGTTGCAGAGCTGAAAGTCCTGCCTCTATGGATGATCTACCACTTTGGAAGTTTGAAGATCGTGTGGAGAGCTTCCCCACCAAGGATCTTGCTTTGGCCTTTTCTGGTCAAAAGGCAATCCAGGTTGAAGAACCTGATCCACAAGTAGAACTCAGAGTAGATGCCATTGGTCCAGCATTGCTTGGTGAAAGCTTCATTATACCAGTTACCATTGCTTCAAAAGGTTATTTTGTGCACTCGGGAGAGTTGAAAATTAATCTGGTAGATACCAAAGGAGGGGGACTTGTCAGTCCTAGGGAAATTGAGCCATATGCCACGGATAGTCATCATGTAGAGCTAATTGGGGTTTGCGGACCTGGTGAAGACAAATCTCCTGGGAATTCTGACACAATCAGAAAAATTCAGCATTCATTTGGATTGATTTCTGTTCCATTTTTAAAGGATGGGGAATCATGGTCCTGTAAACTAGAAATTAAATGGCATAGGCCTAAACCAGTCATGTTATTTGTTTCATTGAGCTATTCCCCTCAGATTGATGATGCTAACGCACAAAAGGTTCATGTTCACAAGAGTATGCAGATTGAAGGAAAGACTCCTGTTTTAATAAGCCATGAGATGATGCTGCCATTTCGACGTGATCCTTTGCTGCTATCTAGGGTCAAGCCCCTTACTGAGGTTGAGAAGTTGCCATCTTTGCCCCTCAAAGAAAAAAGTATACTCATTGTCAGTGCCAAAAATTGTACAGAGGTTCCGTTAAGGATACTGTCAATTACTATTGAAGCAGATGATGATGCTTCTGGAAGCTCATGCATTGTACGCTCAGCAAGTAACCAACAAGCAGACACTGTTGGGCCTAATCTCCTCGTGCCAGGTGAGGAGTACAAGAAAATTTTCTCTGTCACCCCGGTGGCTACTACCTCTAGGGTAAGGATGGGTAATGTGTGCCTGAAGTGGATAAGAGATGCAGGGTATCTTAAGCAGGGTAGTTCTGGTGTTTCTGGGGTTCTAACCAAGCATAGGCTTCCCGAGGCAAGTGTAGAAATATCTCCGGTGATTGTGAGCCTGGAGTGTCCACCTCATGCTGTGCTTGGAGAGCCGTTTACGTACTTCATCAAAATCCAAAATCAGACAGAGTTACTGCAGGAGATTAAGTATTCATTAGTAGACTCACATAGCTTTGTTTCGTCTGGGTCCCACAAGGATACAATCTTTGTCTTGCCAAAATCTGAGCATGTCTTGAGTTACAAGCTTGTCCCACTGGCCTCTGGTTCACTGCACTTGCCCAAGGTTACAGTGACTGCTGCTAGATATTCAACTGCATTTCAGCCTCAAGTTGCTGCATCTACTATTTTTGTGTTCCCTGCAAAGCCTCAGTTCTCAACGACAAGAATGGAAAAAAGTAGTCCAGAATCTGCTATAGTTGCAGCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41768.p1 GENE.R_Transcript_41768~~R_Transcript_41768.p1 ORF type:complete len:1189 (+),score=254.99,Foie-gras_1|PF11817.4|2.8e-59 R_Transcript_41768:182-3748(+)
MEEYPEELRTPPVPLISLVGYPELHASISAHLHSEKPPINTLALPDFSKISVLSKNPKSTDHQSQPQPPLGILKKDWLIKHRKKIPAVVGALFPSDHVSGDPAQWLQLCTLLDNLKAVLRTRNIKLIVVVVQSSSEDDMNEDRMIALRKRAEVDSKYIINFSIRDSSEVKQSLNRLGAVFAELVSIYYRDEGRRIKSRVEKRNFAYPELGIRYCFKVAVFAEFRRDWVEALKFYEDAYHALREMVGTSTRLPAIQRLIEIKTLAEQLHFKISTLLLHGGKIIEAVLWFNQHCTSYKKLVGAAEVTFLHWEWISRQFLVFAELLETSSKNIPGFSSIVLTVGDKTVTDLELQPAYYYQLSSQYLKEKRSCLELALSMWEVFSESDAAGESVIPSGYVGQFARLLEQSPDEVTLQPLTDEDFVRYAIAEGKRFQDSFEIIALLKKSYEIYTGMKALRTASYCASQMAKEYFSIGETKNAKQYFDYAVSLYRHEGWVTLLWEILGYLRECSKQDGSLKEFVEYSLEMAALPVSSEDSFGYKDCGPAGPPSFQQREVIHKEVVGLVTGELALSSNDVDKNLRVTIDSPLHLEIDIVSPLRVVLLASVVFHEQAVKPGMPTQITLSLLSQLPLHFEIDALEVQFNQSECNFAIQNSQKASAPLNSTSQPGYRVETAPALALLTNKWLRLTYDVKSDRSGKLECVSVIARIGSHFTICCRAESPASMDDLPLWKFEDRVESFPTKDLALAFSGQKAIQVEEPDPQVELRVDAIGPALLGESFIIPVTIASKGYFVHSGELKINLVDTKGGGLVSPREIEPYATDSHHVELIGVCGPGEDKSPGNSDTIRKIQHSFGLISVPFLKDGESWSCKLEIKWHRPKPVMLFVSLSYSPQIDDANAQKVHVHKSMQIEGKTPVLISHEMMLPFRRDPLLLSRVKPLTEVEKLPSLPLKEKSILIVSAKNCTEVPLRILSITIEADDDASGSSCIVRSASNQQADTVGPNLLVPGEEYKKIFSVTPVATTSRVRMGNVCLKWIRDAGYLKQGSSGVSGVLTKHRLPEASVEISPVIVSLECPPHAVLGEPFTYFIKIQNQTELLQEIKYSLVDSHSFVSSGSHKDTIFVLPKSEHVLSYKLVPLASGSLHLPKVTVTAARYSTAFQPQVAASTIFVFPAKPQFSTTRMEKSSPESAIVAAE*

Click here to download the sequence:
Link to NCBI Protein BLAST