Transcript Information: R_Transcript_4177.p1


Annotated TAIR IDAT3G57490.1
Annotated Gene NameRibosomal protein S5 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21279824-21280887 | Reverse length=276
E-Value4.4E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1262.31456466372
Replicate 2213.92457027926
Replicate 3238.64786684293
Condition 2: 8 Hour
Replicate 1279.81645666129
Replicate 2283.37847113201
Replicate 3289.45540080498
Condition 3: 24 Hour
Replicate 1399.95676742604
Replicate 2352.12122448887
Replicate 3337.53869114637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4177.p1 GENE.R_Transcript_4177~~R_Transcript_4177.p1 ORF type:internal len:318 (+),score=34.09,Ribosomal_S5|PF00333.16|4.1e-32,Ribosomal_S5_C|PF03719.11|2.5e-25 R_Transcript_4177:2-952(+)
ACCCCCCCTTTTCTCGGAACAAAAAACCCTAGTGTCTCTCTCCCATATAAATCTCTCTTTCCTCATTTTCCACAATCTCTTTTCTATCGCCTCTCTGAACTCCCTTCACTTTCTCTCACTCCCCAAACCCTAAACCAAAACCTAAACCACCAAAACACCAAAATGGCAGAAAGAGGCGGAGAGAGGGGCGGATTCTCACGCGGATTCGGAGGCCGAGGCGGGCCCCCTAGAGGCGACCGTGGCCGCGGTGGTCGCCGCCGTGCAGGCCGTCGCGACGAGGAGGAGAAGTGGGTCCCAGTGACCAAACTCGGCCGTCTCGTAAAGGAGCGCAAAATCACAAGCCTGGAGCAAATCTACCTCCACTCACTCCCCATCAAGGAGCACCAGATCGTTGACCAACTTATCGGCCCAGCACTCAAGGACGAGGTCATGAAAATCATGCCGGTCCAGAAACAGACCCGGGCCGGTCAGCGAACCCGGTTCAAGGCCTTCGTCGTCGTCGGTGACGGAAACGGCCACGTCGGATTGGGAGTCAAGTGCTCCAAGGAGGTTGCCACTGCCATCCGTGGCGCAATCATATTGGCTAAGCTGTCTGTGATTCCGGTCAGGAGAGGATACTGGGGTAACAAGATTGGGAAGCCACACACTGTTCCTTGTAAGGTGACTGGGAAATGTGGGTCCGTTACTGTGAGGATGGTCCCGGCCCCACGTGGTGCTGGTATTGTTGCTGCTAGGGTTCCTAAGAAGGTGCTTCAATTTGCTGGTATTGAGGATGTTTTCACTTCTTCTCGTGGGTCCACCAAGACCCTCGGTAACTTTGTCAAGGCAACATTTGAGTGTTTGTTGAAGACCTACGGTTTCTTGACACCAGACTTCTGGAAGGAGACCCGCTTCACCAAGTCTCCATTCCAAGAGCACACCGACTTCCTGTCTAAGCCCATTGGCAAGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4177.p1 GENE.R_Transcript_4177~~R_Transcript_4177.p1 ORF type:internal len:318 (+),score=34.09,Ribosomal_S5|PF00333.16|4.1e-32,Ribosomal_S5_C|PF03719.11|2.5e-25 R_Transcript_4177:2-952(+)
TPPFLGTKNPSVSLPYKSLFPHFPQSLFYRLSELPSLSLTPQTLNQNLNHQNTKMAERGGERGGFSRGFGGRGGPPRGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKERKITSLEQIYLHSLPIKEHQIVDQLIGPALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWKETRFTKSPFQEHTDFLSKPIGKL

Click here to download the sequence:
Link to NCBI Protein BLAST