Transcript Information: R_Transcript_417794.p1


Annotated TAIR IDAT3G58590.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21666262-21668487 | Forward length=741
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17352314393635
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.30002662182458
Condition 3: 24 Hour
Replicate 10.75893577612245
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_417794.p1 GENE.R_Transcript_417794~~R_Transcript_417794.p1 ORF type:internal len:121 (+),score=20.02,PPR|PF01535.16|78,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.099,PPR|PF01535.16|0.022,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|0.024,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.00063 R_Transcript_417794:3-362(+)
GGGTTTGTCGAAGAGTCAATAGTAATGTTTTGCAAGCTCTTGAGATCTGGACATGGTCTTACTGGGAGCACTATAGTGGGATTGTTGTCTGGTTTTGTGGCTCTGGAAGATTTTGAATTAGGCCATCAAGTACATAGCCTAGTGATTAAAAATGGTTTAAGTTGTGATGTTTCTGCTTCCAATGCCCTGCTTAACATGTTTGTCAAGTGTATGGACTTATCTTCTGCTGAAAGAATGTTCGAGGAGGTCTGTTTTCGGGATGTTGTGACGTATAATACCTTAATTGGAGCATTGGCAAGAGGTGAGACACCTGGTAAGGGATTAGAGCTGCTTTTGTCTTTGCTCGCTGAAGGAATGAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_417794.p1 GENE.R_Transcript_417794~~R_Transcript_417794.p1 ORF type:internal len:121 (+),score=20.02,PPR|PF01535.16|78,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.099,PPR|PF01535.16|0.022,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|0.024,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.00063 R_Transcript_417794:3-362(+)
GFVEESIVMFCKLLRSGHGLTGSTIVGLLSGFVALEDFELGHQVHSLVIKNGLSCDVSASNALLNMFVKCMDLSSAERMFEEVCFRDVVTYNTLIGALARGETPGKGLELLLSLLAEGMR

Click here to download the sequence:
Link to NCBI Protein BLAST