Transcript Information: R_Transcript_417811.p1


Annotated TAIR IDAT1G69940.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)ATPPME1, PPME1
Annotation TypeHomolog
Chromosome Positionchr1:26343549-26344971 | Reverse length=361
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4845918837536
Replicate 20.92903984142912
Replicate 30.4054289840027
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.58108950496188


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_417811.p1 GENE.R_Transcript_417811~~R_Transcript_417811.p1 ORF type:5prime_partial len:113 (+),score=21.96,Pectinesterase|PF01095.15|1.3e-16 R_Transcript_417811:3-341(+)
GCGGATGGAGAAGGTGGATATTCTTTTGCTCATTGCAACGTGACAGGATCTGACCATGCAACTGCTTTCTTAGCTAGAGCATGGATGGAAGCAGCACGAGCTGTTTACTCTTATTGTACTATGAGCGACGTCGTCAAACCTGAGGGTTTTTCAGATAACAATAAGCCCCCCGTTCAACAGACGGTCTTTTTTGGAGAGTACAAGAATACTGGTCCTGGAGCAGCTACTGATGGTCGAGTTAAATATGTGAAGAAGCTAACAAGTGCTCAAGCTCAAGAATTCATTAGCTTGGAATACATTGATGCTTCCAAATGGCTACTTCCAGCTCCTAGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_417811.p1 GENE.R_Transcript_417811~~R_Transcript_417811.p1 ORF type:5prime_partial len:113 (+),score=21.96,Pectinesterase|PF01095.15|1.3e-16 R_Transcript_417811:3-341(+)
ADGEGGYSFAHCNVTGSDHATAFLARAWMEAARAVYSYCTMSDVVKPEGFSDNNKPPVQQTVFFGEYKNTGPGAATDGRVKYVKKLTSAQAQEFISLEYIDASKWLLPAPRV*

Click here to download the sequence:
Link to NCBI Protein BLAST