Transcript Information: R_Transcript_41801.p1


Annotated TAIR IDAT1G04300.3
Annotated Gene NameTRAF-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1148818-1153895 | Reverse length=1082
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.930350731778
Replicate 221.437940389998
Replicate 327.785210195508
Condition 2: 8 Hour
Replicate 128.863705831766
Replicate 233.413938246469
Replicate 341.393944640006
Condition 3: 24 Hour
Replicate 137.163076204706
Replicate 227.486922123051
Replicate 336.102243839387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41801.p1 GENE.R_Transcript_41801~~R_Transcript_41801.p1 ORF type:complete len:1141 (+),score=277.44,MATH|PF00917.22|1.1e-25 R_Transcript_41801:238-3660(+)
ATGGCTGGGGTTGCGAGCGAGGAGTCTGGTGCTGGGAGGTCGTCGTCGGAGGGGTTATCGAGTGGGCAACGCTGTCAATCAGGGGATGCGTTGGCGGAATGGCGGTCTTCGGAGCAGGTTGAGAATGGCACTCCCTCCACTTCACCGCCGTACTGGGATACTGACGACAGTGATGAGGATGGAGGACCTAAACCTTCAGAGCTGTACGGAAAGTACACATGGAAGATAGAAAAGTTTTCCCAGATCAACAAGCGAGAGCTTCGTAGTAATGCCTTTGAAGTTGGCGGCTACAAATGGTATATTTTGATCTATCCACAGGGGTGTGATGTGTGCAATCATCTCTCCTTGTTTCTCTGTGTTGCAAACCATGATAAGCTTCTTCCAGGGTGGAGTCATTTTGCTCAATTTACTATAGCTGTGGTGAATAAAGATCCCAAAAAATCGAAATATTCTGATACACTACATCGCTTCTGGAAGAAAGAACATGATTGGGGTTGGAAAAAATTTATGGAGCTATCAAAAGTGTCTGATGGTTTTGTGGATGCAGACACACTTATTATAAAGGCTCAGGTTCAAGTAATCAGGGAGAAAGCAGATCGTCCATTCCGTTGCCTTGACTGTCAGTATAGAAGAGAGCTTGTTCGAGTTTATTTAACCAATGTAGAGCAGATCTGCCGGCGTTTTGTTGAAGAGAGAAGAGGAAAGCTAGGAAAGCTGATAGAGGACAAAGCCAGATGGTCAAGCTTTTGTGCATTTTGGTTAGGAATGGATCAAAATGCCAGACGTCGCATGTCTAGGGAGAAGAAGGACATGATACTGAAAGTCGTGGTTAAGCATTTTTTCATAGAAAAGGAAGTCACATCGACTCTGGTTATGGACTCCTTGTATAGTGGACTTAAGGCACTTGAAGGCCAAAGCAAAGGCAAGAAAGGGAAGGGAAAATTGCTTGAGGGTGAAGATATACCTGCTCCAATCATTCGGTCAGATAAGGATATGTTTGTTTTGGTAGATGATGTCTTGTTACTACTTGAGAGGGCCGCAATGGAACCGCTTCCCCCAAAGGATGACAAGGGTCCCCCTCAGAACCGAAAGGATGGAGCCAGTGGAGAGGAGTTCAACAAGGATTCAATTGAGCGTGATGAGAGGCGTTTGACAGAATTAGGTCGAAGGACAGTGGAGATATTTGTGCTTGCCCATATTTTCAGCAACAAAATTGAAGTGGCCTACCAAGAAGCTGTTGCCTTGAAGAGGCAAGAGGAACTGATCCGTGAAGAGGAGGCTGCATGGTTAGCTGAGAGTGAGCAGAAAGCAAAGCGAGGTGCTGAAAAGGACAAGAAATCAAAGAAGAAACAGGGTAAACAGAAGCGGAACAACCGGAAGGGAAAAGAGAAGGTGAAGGATGAAAAGCCTGTTGTCACGATGCAAGATAAAAAGCTTCATCAAACTCAGATTGCTGATAGGAAAGACCTGGATGAGTCCCAAACGATGCCTGAAAAGGATGAAGCCCTTGAAGATGTATCTGATGTGTCTGATTCTGTGGAAGGTGCTGTGGACATGCTACAGCACGATTCCGAAGATAGAGATGCAAGTCCTGTTAACTGGGACACAGATACATCAGAAATCCAGCCCCCAGCGGAGGTGAGTGGTAGTGAAATCAGCAGTGTATCGACTGTTCCAAATGGAGTGGATAAGAGGAGTTCATCTGTAATGGATGATAGTTCCTCAACATGTTCTACAGATTCTGCCCCCTCAGTCATTAATGGGTCATACAGATCAAATTCCTTCGTGAAACATAAAAGTCAAAAGTCACCTACAAGAGGAAAGAACTATCGAGGTAAGGTGACATATGAGGAATATGGTGGGGCAAATGAGGCAGAAAGTCGGCCCTCTGAACTTGCTGATGCTGGGTTTCACAATGACGTTTCTCCTAGTCGCAAAGCAGTTGAATCTAATGAGTCTGACGGAGCTGTTGTTACAGCCTTGCAGGATAGGACAAAGTGGCCAGAGTTGACTGCAGCTAAGAAACAGGATGACGAGGTGGTCCTGCTGCAGAGGAAGCCAAGCAACAAGGACCATGTGGATGTAGGAACATCCAAAGACAAAATGGCTGCAGCTCCACGCCTATCTAAGAGCCCTTCGAGAAATGCAAGTGCAGTACCAGTAGTTCAGTCGAAGTCAGACTTGAAAAGTATTCCTCCTGGTGATTCGGCTGCAGTAGCACGGAAAACGTTATCAAATGGGCAACAACAAACTGAGAAGGCTACATCAGTGGCAGTTGCATCTCAAACAGCAGCTGTATCAAAACCGGATTCTTCAAAGACATCCCCAAAACCTGTTGATAAACTTAATGGACAGCAGGCAGCGGGATTGTCAAGGCCATCAAGTGCTCCTCTCATTCCTGTGACCCTGCCAGCTAGCCCAGTTGTTTCCATGGTACAAGCAGCAGCATCAAGCGCTCCACTGTTGTCCCGTTCAGTTAGCGCCACTGGACGCTTGGGTCCTGACCCGTCTTCTATAGGTCATGCATATGTTCCACAATCCTATAGAAATGCAATTGTGGGTAACTCATTGAATGCAAACTCAGCTAGTTTCACACATTCCCCTCAGTCAGCAAATACAATGGTCAGTACATCAACAGCTTTCACCCAACAGCCTTCATTGGTACCCTCTTCGATATATCTTCCTCAAGCTCCTGAAAGGATGGAACCAAACTGTGTTAGTTCAGGGATTTCTTTCACTGCAACTCAGGAGGAGGTGCTTGGTAACCAAACATGGATGGATAGCCCTCAGAGTGATGTCAGCAGAAGTTTAATGTTTGAATCGGCATCCAGGCTTCATGATATTCCAAGCTTTGATTTGTATCGGCCCATGAATTGCAGGCCCCATGAACTCTTTCCCTCTGATTTATCAGCTGGGACTTCTGGTCGTCAGGTTCAAGGTGCATTAGCCGATGAATTCCCACACCTGGACATCATAAATGATCTGCTAGATGATGAGCAGGGCATCGCGCTGGCAACTCATGGGAGCACTACCTTCCAGGGTCTCAGCAACGGTCCCGCCCTTTTCAATAGGCAGCTCACCTACCCTGCAAGTGATATGAGTGAAGTGGGTTCATTGGGAAGCTCATGTAGGTTTGATAGATCCAGAAGTTACCCTGATGATGGCTTCCAGCAGGAGCATGCTTCTAGTAGCCATTATGATTCAGTGCGAGAGTTCATTCCCCACGGTAATTCGATGCCTTATATGAATGGCCAGATTGATAGCTTGGTATCGAACCAGTGGCAGATGTTGGGTCCTGATCTTTCATTGTTGGGCTTGAGAAGTTCGGGGATGGATAGTTACCCGTATAATGTTTCTGATTACTCGAACCTGGCGTGTGGCGTAAATGGTTACACAATGTTCCGGCCTTCGAATGGACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41801.p1 GENE.R_Transcript_41801~~R_Transcript_41801.p1 ORF type:complete len:1141 (+),score=277.44,MATH|PF00917.22|1.1e-25 R_Transcript_41801:238-3660(+)
MAGVASEESGAGRSSSEGLSSGQRCQSGDALAEWRSSEQVENGTPSTSPPYWDTDDSDEDGGPKPSELYGKYTWKIEKFSQINKRELRSNAFEVGGYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVSDGFVDADTLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRGKLGKLIEDKARWSSFCAFWLGMDQNARRRMSREKKDMILKVVVKHFFIEKEVTSTLVMDSLYSGLKALEGQSKGKKGKGKLLEGEDIPAPIIRSDKDMFVLVDDVLLLLERAAMEPLPPKDDKGPPQNRKDGASGEEFNKDSIERDERRLTELGRRTVEIFVLAHIFSNKIEVAYQEAVALKRQEELIREEEAAWLAESEQKAKRGAEKDKKSKKKQGKQKRNNRKGKEKVKDEKPVVTMQDKKLHQTQIADRKDLDESQTMPEKDEALEDVSDVSDSVEGAVDMLQHDSEDRDASPVNWDTDTSEIQPPAEVSGSEISSVSTVPNGVDKRSSSVMDDSSSTCSTDSAPSVINGSYRSNSFVKHKSQKSPTRGKNYRGKVTYEEYGGANEAESRPSELADAGFHNDVSPSRKAVESNESDGAVVTALQDRTKWPELTAAKKQDDEVVLLQRKPSNKDHVDVGTSKDKMAAAPRLSKSPSRNASAVPVVQSKSDLKSIPPGDSAAVARKTLSNGQQQTEKATSVAVASQTAAVSKPDSSKTSPKPVDKLNGQQAAGLSRPSSAPLIPVTLPASPVVSMVQAAASSAPLLSRSVSATGRLGPDPSSIGHAYVPQSYRNAIVGNSLNANSASFTHSPQSANTMVSTSTAFTQQPSLVPSSIYLPQAPERMEPNCVSSGISFTATQEEVLGNQTWMDSPQSDVSRSLMFESASRLHDIPSFDLYRPMNCRPHELFPSDLSAGTSGRQVQGALADEFPHLDIINDLLDDEQGIALATHGSTTFQGLSNGPALFNRQLTYPASDMSEVGSLGSSCRFDRSRSYPDDGFQQEHASSSHYDSVREFIPHGNSMPYMNGQIDSLVSNQWQMLGPDLSLLGLRSSGMDSYPYNVSDYSNLACGVNGYTMFRPSNGR*

Click here to download the sequence:
Link to NCBI Protein BLAST