Transcript Information: R_Transcript_419055.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value8E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59475940189533
Replicate 20.330278882953
Replicate 30.48902024081674
Condition 2: 8 Hour
Replicate 10.22009766244715
Replicate 20.2261212770457
Replicate 30.3671112260303
Condition 3: 24 Hour
Replicate 10.59329164745752
Replicate 20.19824951811755
Replicate 30.73778779843474


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_419055.p1 GENE.R_Transcript_419055~~R_Transcript_419055.p1 ORF type:3prime_partial len:890 (+),score=82.14,RVT_1|PF00078.23|1.7e-38,zf-RVT|PF13966.2|9.4e-20,RVT_3|PF13456.2|8.4e-07 R_Transcript_419055:895-3561(+)
ATGTCCCAGGGGCCTGTTCCCCCCATTCTAGCAAGTGATTGGGAGAAGTTGTGTCGACCATTTACGGATAGTGAAATTCATGCAGCACTTAATGGGATGGGTCCTTACAAAGCACCAGGCCCAGACGGATTCCAAGCTTTGTTTTTTCAAAGGAATTGGGAGAAGGTCCAACCAAGTGTTTGTGCCACGATTCGAAGTATACTGGATGGAAAAGGTCTGCCTTCCTCCTTAAATGCTACATTCCTGGTCTTAATTCCCAAAGTAGAGTCACCTTGCACTGTGAAACAATTTCGGCCCATAGGACTATGCAACGTCCTATACAAATTTGTGACTAAAACCTTGGTTAACTGCATTAAACCAATACTCCCCAAGCTGATTGCACCCACTCAGTCCAGCTTTGTTCCAGGACGCCAAATTACAGATAATGTCGTCATTGTTCAGGAGGTGCTACATTCCATGCGCAAGAAGACCAGCTCAAAGGGCTTCATGGCTATTAAAATTGACTTAGAGAATGCCTATGACCGCCTTAAATGGAGTTTTATAGAAGATACTCTAATTGATATGGGTCTCCCCATTTTGCTGCGGGGGATTATTATGCAATGTGTAACAACCCCCACAATGCGGATTCTTTGGAATGGGGAACCTACTGAAGAATTTACCCCATCCCGGGGCATACGCCAAGGTGATCCGCTCTCTCCATACCTATTTGTCATGTGTATCGAAAGGCTTAACCAATTGATCGAACAAGCTATTAATGATGGAACATGGCGGCCCATAAGCTGTAATAGAGGAGGACCTCTTCTCTCCAATCTCTTCTTTGCTGACGATTTGATATTATTTGCGGAAGCGGACTGTGAGCAAGCCTTAGTCATCAAAAAATGTCTCGACATTTTCTGTGAAGCATCAGGGCAAAAGGTCTCCTATGAGAAATCTCGTGTTTTCTTTTCTCGGAATGTCTCCACTGCATCAGCCGAGAGACTGAGCGAAGCCCTGGGCATTCCCCTAACCAATGATCTTGGAGCATATTTGGGCATGCCCTTAATTAATGGAAGGATAACCCGGGCTACTTATCAGCACATAGTTGATAAGGTGGACAAGAGACTAAGCGGTTGGAAGGCACACTGTCTTTCACTCGCGGGAAGGGCAACTCTTGTTAAATCTTCATTGTCGTCGATCCCATATTATTCAATGCAAACGGCGAAACTCCCTCAGTCCACTTGTGACGAGTTGGACAGAAAGGCTAGACGTTTTTTATGGGTGGGAGACGATGACAAAAGAAGAATTCATCTTGTCAATTGGGATCAAGTTCAACGGGATAGAAAGGAAGGAGGACTTGGCATCCGATCAATGCGACAAGCGAACGCGGCTTTTTTGATTAAACTAGGTTGGAGGGTGCTTTCCGAGCCTCATTCTCTTTGGGCTATGGTATTGTGGTCCAAATATTGCAATAACAGATGTGATCTAGACATGTTTATGCATAGGAGTGATTGCTCTAGCACATGGCGAGGAATTGTTGACAACGTTCAAGTACTTCGACAGGGAGCTAGGAGTGAAATTGGCAATGGCAAGCGAACTTTTTTCTGGGACCATGCTTGGGCCGCCGAAATTCCGCTAGCTAAGTTGGTCATTAAAGAGGTACCCGCCCATCTACAAGACATCACTGTCGATGAGGCATGGTCCCCTCAATTGGGTTGGAGATGGGATGTTTTCTCAGAGGATCTGCCTGATTATATACTCAAACAGATAGAGGCTTTTAATGTGATTGAAGATGACACCCTTGTAGATACCTTGATTTGGAATAGCTCACCCTCGGGCAAATTCACCATCAAGTCGGCTATGAGACTTATGCGTGATGAGACACCACGCCATGACAAAATGTGGGACATAGCTTGGAAGGTTCATGCTCCTCAACGGGTTAAAATGTTTTTGTGGTTGGCTTTGTGCGACAAGCTGCTTACCAATGCCAACAGAGTTGTTAGACACTTATCAGAAGACCCAAGCTGTACAATTTGCGGAGAGGCTGAAGAGAATATGGACCATATCCTGCGGCGATGCTCTATGGCCAAATTACTATGGGGCAGCCTTGGTGCTACATGGGACTCGGAATTTATGCAGAAGCCGGTAAAGCTATGGCTAGTTTCTGAAATGGATCCTACTAACCCTGATCGGAATGATGATTGGCCCACAACCTTTGCATTAGCAACTTGGTGGTTATGGAAATGGAGAAACAATCATGTCTTTGGAAGGCCCAATGAAGTTCCCTATGACCCTGTACCCTTCATCAGAGACCGCGTACAAGAGGTAGAGCAAGCCTTCAAAAAAGATGAAATCATTTATGGTGGTAATGTATCCCGTCGGAAGGAAGCCTTAATCCGATGGAGCCCTACTCTGGAGGGGTGGTGCATTTTGAACACTGATGGTGCGGCGAAGGGGAACCCAGGACCTGCTGGGGGTGGTGGAATTGTTCGCGACTCAAGCGGCAAGATGATAAGTGTTTTCTCAAGCAGATGGGGCAGTTGTACTTCCGTCCGAGCGGAGCTGCTGGCCTTGCGGAGGGGACTTCAAATAGCCAAGGAGAATGGCGTGACGAAGCTAATTGTGAATGTTGATTCGGAAGTGTTACTGCATCTGATAAGGAAGGACCTAAAGCAACCTTGTGCTTTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_419055.p1 GENE.R_Transcript_419055~~R_Transcript_419055.p1 ORF type:3prime_partial len:890 (+),score=82.14,RVT_1|PF00078.23|1.7e-38,zf-RVT|PF13966.2|9.4e-20,RVT_3|PF13456.2|8.4e-07 R_Transcript_419055:895-3561(+)
MSQGPVPPILASDWEKLCRPFTDSEIHAALNGMGPYKAPGPDGFQALFFQRNWEKVQPSVCATIRSILDGKGLPSSLNATFLVLIPKVESPCTVKQFRPIGLCNVLYKFVTKTLVNCIKPILPKLIAPTQSSFVPGRQITDNVVIVQEVLHSMRKKTSSKGFMAIKIDLENAYDRLKWSFIEDTLIDMGLPILLRGIIMQCVTTPTMRILWNGEPTEEFTPSRGIRQGDPLSPYLFVMCIERLNQLIEQAINDGTWRPISCNRGGPLLSNLFFADDLILFAEADCEQALVIKKCLDIFCEASGQKVSYEKSRVFFSRNVSTASAERLSEALGIPLTNDLGAYLGMPLINGRITRATYQHIVDKVDKRLSGWKAHCLSLAGRATLVKSSLSSIPYYSMQTAKLPQSTCDELDRKARRFLWVGDDDKRRIHLVNWDQVQRDRKEGGLGIRSMRQANAAFLIKLGWRVLSEPHSLWAMVLWSKYCNNRCDLDMFMHRSDCSSTWRGIVDNVQVLRQGARSEIGNGKRTFFWDHAWAAEIPLAKLVIKEVPAHLQDITVDEAWSPQLGWRWDVFSEDLPDYILKQIEAFNVIEDDTLVDTLIWNSSPSGKFTIKSAMRLMRDETPRHDKMWDIAWKVHAPQRVKMFLWLALCDKLLTNANRVVRHLSEDPSCTICGEAEENMDHILRRCSMAKLLWGSLGATWDSEFMQKPVKLWLVSEMDPTNPDRNDDWPTTFALATWWLWKWRNNHVFGRPNEVPYDPVPFIRDRVQEVEQAFKKDEIIYGGNVSRRKEALIRWSPTLEGWCILNTDGAAKGNPGPAGGGGIVRDSSGKMISVFSSRWGSCTSVRAELLALRRGLQIAKENGVTKLIVNVDSEVLLHLIRKDLKQPCAFF

Click here to download the sequence:
Link to NCBI Protein BLAST