Transcript Information: R_Transcript_41913.p1


Annotated TAIR IDAT3G10300.3
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3186436-3188071 | Forward length=335
E-Value6.7E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.223985732549
Replicate 256.272693351755
Replicate 350.081811390346
Condition 2: 8 Hour
Replicate 171.404432252991
Replicate 287.429659124387
Replicate 384.106220638563
Condition 3: 24 Hour
Replicate 165.593734936297
Replicate 264.042444294068
Replicate 358.525819054095


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_41913.p1 GENE.R_Transcript_41913~~R_Transcript_41913.p1 ORF type:5prime_partial len:322 (+),score=5.14,EF-hand_1|PF00036.28|0.00034,EF-hand_1|PF00036.28|4.1e+02,EF-hand_1|PF00036.28|5e-06,EF-hand_1|PF00036.28|8.4e+03,EF-hand_1|PF00036.28|5e+03,EF-hand_6|PF13405.2|0.00087,EF-hand_6|PF13405.2|2.3e+03,EF-hand_6|PF13405.2|4.7e-06,EF-hand_6|PF13405.2|1.3e+04,EF-hand_6|PF13405.2|6.3e+03,EF-hand_5|PF13202.2|0.00048,EF-hand_5|PF13202.2|8.1e-05,EF-hand_7|PF13499.2|0.0035,EF-hand_7|PF13499.2|4.6e-05 R_Transcript_41913:3-968(+)
CCCTTGATCGAAATCCCATCAGTATTTTCTGTCTCCTCAAACTCAAAAAAAAAAAAAAAAAAAAAAACTCTATTGATCATCAAAATGTCAGGTTACGGATACCCCCACAACCCCCCGGGCTACGGCTACGGTGGGCCTCCGCCACAGACAGCCCAACCCTACGGCCATGCACCCCCCTACGGTGGCCCAGGCCCACATTCCCCCACAGCCCAACCCTACAGCGGTGGGCCCCCCTCAGCCCCGCCCTACGAGAAGCCCCCGAAGGAGAACAAGCCCTACAGCGCGTCAGCATACGCGAACCCCCCACCAGGCGCGTCAGCATACGCGCACCCCCCACCAGGCGCGTCAGCATACGCGCACCCCCCACCAGACGCGTCGTCGGGGTACCCGTCGTATGGCGGGTCGGGTAGCCCGTTTGCGAGCTTGTTGCCGTCGACGTTCCCGCCGGGTACAGACCCGAATGTGGTGGCGTGTTTCCAGGTGGCGGACCAGGATGGGAGTGGGTTGATTGATGATAAGGAGCTTCAAAGAGCTTTGTCTTCTTATAATCAGAGCTTTAGCCTTCGCACTGTTCATCTCCTCATGTTCAATTTCACCAACTCCAATTCTCGCAAGATCGGTCCTAAGGAGTTTACATCTCTGTTCTACAGTCTGCAATCCTGGAGGGGAATATTCGAGAGATTTGATAGAGACAGGAGTGGCAAGATAGATGCTGCAGAGCTGCGTGATGCATTGTATAACCTTGGATTTGCCGTCTCTCCTGCAATTTTGGATTTGCTTGTCTCCAAGTTTGATAAGACTGGGGGGAAGAGTAGGGCTATCGAATATGATAACTTCATCGAGTGCTGCCTTACAGTAAAGGGTCTGACAGAGAAATTCAAGGAGAAGGACAAGGCGTACACTGGCACCGCAACCTTTACTTATGAGGAGTTCATGCTCACAGTTTTACCCTTTCTTATCGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_41913.p1 GENE.R_Transcript_41913~~R_Transcript_41913.p1 ORF type:5prime_partial len:322 (+),score=5.14,EF-hand_1|PF00036.28|0.00034,EF-hand_1|PF00036.28|4.1e+02,EF-hand_1|PF00036.28|5e-06,EF-hand_1|PF00036.28|8.4e+03,EF-hand_1|PF00036.28|5e+03,EF-hand_6|PF13405.2|0.00087,EF-hand_6|PF13405.2|2.3e+03,EF-hand_6|PF13405.2|4.7e-06,EF-hand_6|PF13405.2|1.3e+04,EF-hand_6|PF13405.2|6.3e+03,EF-hand_5|PF13202.2|0.00048,EF-hand_5|PF13202.2|8.1e-05,EF-hand_7|PF13499.2|0.0035,EF-hand_7|PF13499.2|4.6e-05 R_Transcript_41913:3-968(+)
PLIEIPSVFSVSSNSKKKKKKKTLLIIKMSGYGYPHNPPGYGYGGPPPQTAQPYGHAPPYGGPGPHSPTAQPYSGGPPSAPPYEKPPKENKPYSASAYANPPPGASAYAHPPPGASAYAHPPPDASSGYPSYGGSGSPFASLLPSTFPPGTDPNVVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFNFTNSNSRKIGPKEFTSLFYSLQSWRGIFERFDRDRSGKIDAAELRDALYNLGFAVSPAILDLLVSKFDKTGGKSRAIEYDNFIECCLTVKGLTEKFKEKDKAYTGTATFTYEEFMLTVLPFLIA*

Click here to download the sequence:
Link to NCBI Protein BLAST