Transcript Information: R_Transcript_419618.p1


Annotated TAIR IDAT1G09890.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3214237-3217386 | Reverse length=617
E-Value2.4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13037829253371
Replicate 20.14997357440213
Replicate 30
Condition 2: 8 Hour
Replicate 10.17489903533747
Replicate 20
Replicate 30.12965436157419
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_419618.p1 GENE.R_Transcript_419618~~R_Transcript_419618.p1 ORF type:internal len:140 (+),score=23.30,Rhamnogal_lyase|PF06045.7|3e-26 R_Transcript_419618:2-418(+)
TTCAATCTTCCTCAAACTAGGATTACTTTCAAGCTTAACAAAGACTGGTTTCACTACATGGCTGTAGCTGATAATAGGCAAAGGAAAATGCCTCTTCCTGATGACAGGTCACCAGAAAGATGCAAAGTTTTGGCTTATCCTGAAGCTGTTCTGCTTACTAACCCAATCGAGGAAGAATTTAAAGGAGAGGTGGATGACAAATACCAGTATTCATGTGAAAACAAGGACCTCCAAGTCCAAGGATGGATATGCACTGATCCACCCACCGGGTTCTGGCAAATCACGCCCAGCGATGAGTTCCGAACTGGTGGACCCCTCAAGCAAAATCTCACCTCTCATGTCGGCCCCGTTAACCTTGCTATGTTCATCAGTGCGCATTATTCCGGGGAGGATATGGTGGTTAAGTTTGCAGAAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_419618.p1 GENE.R_Transcript_419618~~R_Transcript_419618.p1 ORF type:internal len:140 (+),score=23.30,Rhamnogal_lyase|PF06045.7|3e-26 R_Transcript_419618:2-418(+)
FNLPQTRITFKLNKDWFHYMAVADNRQRKMPLPDDRSPERCKVLAYPEAVLLTNPIEEEFKGEVDDKYQYSCENKDLQVQGWICTDPPTGFWQITPSDEFRTGGPLKQNLTSHVGPVNLAMFISAHYSGEDMVVKFAEG

Click here to download the sequence:
Link to NCBI Protein BLAST