Transcript Information: R_Transcript_419627.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44519416962729
Replicate 20.2560524441012
Replicate 30.13967522924483
Condition 2: 8 Hour
Replicate 10.14930405455637
Replicate 20.13634684049503
Replicate 30
Condition 3: 24 Hour
Replicate 10.41995988831166
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_419627.p1 GENE.R_Transcript_419627~~R_Transcript_419627.p1 ORF type:5prime_partial len:164 (+),score=22.51,RVT_1|PF00078.23|9.7e-30 R_Transcript_419627:3-494(+)
AACCTCTCTCCCAGGGTTATTTTGAAGCTTGATATACAAAAAGCCTATAACACTGTTAGTTGGGAATTCATTGAAGTTTTGCTTACTAGCTTTGGGTTTCCTACTGAGTTTAGGAAAAGAGTGATGATGTGTATTACCTCTTCAAGATTTTCTATATATATAAATGGGTGGAATAAGGGGTATTTTAAAGGCCATTGTGGATTAAGACAGGGTGATCCCTTATCACCTTATCATTTTTGTGTTGTGTATGGAGGCTTTGTCAAGAATGTTAAGAAAGCTTATCATCAATCCAGGGTTTCACTACATCCTAAATGTGGAAGAGTTGGTCTTACACACCTTGTGTTTGCTGATGATTTGGTCATTTTTTCTAGGGGTGATAAATCTTTTGTGGTTGTTGCTGTGGACTGTGTTTCTCAATTCTCAAAGATGTCAGGTTTATTCATTAACCCTCACAAATCAAATATTTTCTTTGGTGGAGTAAGTAGGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_419627.p1 GENE.R_Transcript_419627~~R_Transcript_419627.p1 ORF type:5prime_partial len:164 (+),score=22.51,RVT_1|PF00078.23|9.7e-30 R_Transcript_419627:3-494(+)
NLSPRVILKLDIQKAYNTVSWEFIEVLLTSFGFPTEFRKRVMMCITSSRFSIYINGWNKGYFKGHCGLRQGDPLSPYHFCVVYGGFVKNVKKAYHQSRVSLHPKCGRVGLTHLVFADDLVIFSRGDKSFVVVAVDCVSQFSKMSGLFINPHKSNIFFGGVSRR*

Click here to download the sequence:
Link to NCBI Protein BLAST