Transcript Information: R_Transcript_419975.p1


Annotated TAIR IDAT5G47550.1
Annotated Gene NameCystatin/monellin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19286596-19286964 | Reverse length=122
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8928996545634
Replicate 22.6439785709412
Replicate 31.0180772264957
Condition 2: 8 Hour
Replicate 11.995144551257
Replicate 22.9814509121581
Replicate 32.2857583744191
Condition 3: 24 Hour
Replicate 12.3808096384286
Replicate 21.1436060165485
Replicate 31.7834426041176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_419975.p1 GENE.R_Transcript_419975~~R_Transcript_419975.p1 ORF type:complete len:135 (+),score=4.85,SQAPI|PF16845.1|3.6e-18,Cystatin|PF00031.17|1.2e-08 R_Transcript_419975:995-1399(+)
ATGGAAAGTCACAAGCTCTTCCTTATTTTCCCTCTCTTCCTCCTGTTCCTCGCTTTCACAACCGCCACCACCACACCTCCAATCCCAGCACCAGCTCCAGCACCGCCTCCGACGAAGCCACAACCCGGAGGGTACGGTCAAATACAGAACCTCAGTGATCTACATGTGATCGAGGTAGCAAAGTTCGCGGTCAAGCGTCACAACAAGCAAGACAAAAATCATAGGGTTCGGTTCATGAGGATCCTTGACGGCTGGTCTCAGGTAGTCGCTGGGATCAATTACCGGCTTCTCATTTCGTGTAAGCCAAGGAACCAGCGTACCAATCAACGTTACCTGGCCAATGTTTATGAACGACCTTGGCAACAGTTCATCAACCTCACCTCTTTCTATCAAGTGGTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_419975.p1 GENE.R_Transcript_419975~~R_Transcript_419975.p1 ORF type:complete len:135 (+),score=4.85,SQAPI|PF16845.1|3.6e-18,Cystatin|PF00031.17|1.2e-08 R_Transcript_419975:995-1399(+)
MESHKLFLIFPLFLLFLAFTTATTTPPIPAPAPAPPPTKPQPGGYGQIQNLSDLHVIEVAKFAVKRHNKQDKNHRVRFMRILDGWSQVVAGINYRLLISCKPRNQRTNQRYLANVYERPWQQFINLTSFYQVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST