Transcript Information: R_Transcript_42011.p1


Annotated TAIR IDAT3G47850.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17654256-17656000 | Reverse length=352
E-Value1.4E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.411804981261
Replicate 23.9256539021974
Replicate 34.9966538099256
Condition 2: 8 Hour
Replicate 15.6185695771299
Replicate 26.0178010620754
Replicate 36.2733611775842
Condition 3: 24 Hour
Replicate 16.9588820775194
Replicate 25.998030746446
Replicate 35.642439451863


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_42011.p1 GENE.R_Transcript_42011~~R_Transcript_42011.p1 ORF type:complete len:353 (+),score=86.37 R_Transcript_42011:177-1235(+)
ATGGTGGCGATATCACTGTACAGAGGAAACATGCACAGAGTACCACCAGACGTACCAAGACGATGGCTAATGCCTACACCTCGAATCTCTATCAAGGACTTTCGCACTCTTCTCCATCGCCGCTCCAAGGCTCTCTCTCTCCTCCCTTCCTCTTCTTCAAACCCTAGCCCTAACTACCCCCCCTTACAACCACAGCCATCAATCAAGAACGAAGTTGATGATTTTGCGGAGCCTCCAAACCCTAATCCATCTTCCGAACCTTCGAAATCTTCTGATGATAATGTTGTGGTTAAGGTCGAGGATGTTGTTGCTGCTGATTGTCAAGTCAAGCAGGTCGTGGTGACGTCGGCGCTGGATCAGCTGACGTCGGCGTTGCTTGCCGATGACGACAAGGAGAAGGAGAACGAGAAAGAGAAAGTGGAGGAGAAGGTCGCTGTTGATGCAGACAATCGAGCTTTAGAGGGGGACAACAAATTGGATGTCACTAATGAAAAGGAGAGACGGAAAAGGGAGGTTGAGGAAAAGCTGCAAATCTTAAATGAAAAGAAACATAATTTAGTTCAGGCGCTTAAGCAGATTTTGAATGCGGAGGAGGAACTAAAGAGACGAAGCAATATGCAAGCTGGTCGACCTCCTCTTCCTCTTCAAGTGGATGCTTCAAATGACTCTGGGTCAATGACCCGACATGCTACACCTAGAACAGGATCTGAGGCTAATACTACTCCTGATATGGAGGGAGGAGAAGGTGATGATGCTTTAAACCATAACCCATACTCTCGCCAATTGCTCCGCATGAGCAGTACGTCACCCTCTGCAGAGTCTGCTCTCAGAAAGCCTCCATATTTCCAGCATAATGTGGTTTCTCACCCTTCTCGAGCAGCTATGGTCGCTGCTGGGAGTCCGTCACGTTTTGGTCCCTCAGGAAACCAGGGCCACCCTTCAAACTTGCTAACAGTGTCTGTATCTGGGACCAACTATAATGCATCTTCACCCTCCCCAGCAGCATCTGGAGGCACGTCAGGTTTCAGAGATGCTCGACAACCTAGTCCATGGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_42011.p1 GENE.R_Transcript_42011~~R_Transcript_42011.p1 ORF type:complete len:353 (+),score=86.37 R_Transcript_42011:177-1235(+)
MVAISLYRGNMHRVPPDVPRRWLMPTPRISIKDFRTLLHRRSKALSLLPSSSSNPSPNYPPLQPQPSIKNEVDDFAEPPNPNPSSEPSKSSDDNVVVKVEDVVAADCQVKQVVVTSALDQLTSALLADDDKEKENEKEKVEEKVAVDADNRALEGDNKLDVTNEKERRKREVEEKLQILNEKKHNLVQALKQILNAEEELKRRSNMQAGRPPLPLQVDASNDSGSMTRHATPRTGSEANTTPDMEGGEGDDALNHNPYSRQLLRMSSTSPSAESALRKPPYFQHNVVSHPSRAAMVAAGSPSRFGPSGNQGHPSNLLTVSVSGTNYNASSPSPAASGGTSGFRDARQPSPWN*

Click here to download the sequence:
Link to NCBI Protein BLAST